Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02977 ATGAGAAAGCTGTGTTTTAACCCCAAGACGCCGTCGTTTGCCTTGGCCCGCAATTCTCCTTCTTCGCCAGTATCTTCAACCTCATGCCCAACACCTCCCAGGTTGAGCTTTTCGGAACCTACCAGCATCGACGAAGATAGCTTCATCGAGGAAGCAGAGGCACTCATACTGAAATGGAACCCTGACTCCTCCGCCTACGCCAAAGTCACTTCCCTATTTTACCAAGATAAAATCGAAGCCAAACACTACATTAACTGCGTTAACCAGCTTCACCAAACCATGCATTCCTTGCTCTCTCACAACCCTTCCTCCCCCAAACTCATCCTCGCTCACAAATTAATGCAGATCGCCATGAAGAGACTCAAGAAAGAGTTCTACCAGATCTTGTCCATGAACCGCGCTCACCTTGACCCCGAATCAGTCTCCGCCAGATCCTCTCGTACATCCGCCAATTCCAGCTCCTCCGATTACGACGACGACTTCGCCGCCGAAGACGACGATATCCGCGTTGCCGGCGACTCTATATCTGAAGTCGAGCAGGTTTCGTCGGCCGCCATGGCGGATCTGAAATTAATCGCCGACTGCATGGTCTCCTCTGGTTACGCGAAAGAGTGCGTCAGCGTTTACATCATCATCAGAAAATCCATAATTGACGAAGGACTCTATCGCCTCGGCGTTGAGAAACTGAGCTCCTCGCGCGCTAACAAGATGGACTGGGAAGTGCTTGATTTGAAAATAAAGAGTTGGTTAGAGGCAGTAAGGATTTCCGTTAGAACGCTCTTCAACGGAGAGAGAATCCTCTGCGACCACGTCTTCAGTTACTCAGATTCCGTAAGAGAATCTTGCTTCGCCGAGATTTCCAGAGACGGCGCCTCTCTCCTTTTCGGATTCCCCGAACTCGTCGCCAATACAAAGAAATCGTCGCCGGAGAAGCTGTTCCGTGTGCTCGACATGCACGCTGTTTCTTCAGAACTGTGGCCGGAAATCGAGTCCATCTTCTCCTCAGATTATAGCTCCGGCGTGCGTTCTCAGGCCCTGGCTTCACTTCAACGACTCACCGAGTCCGCGCAATTCTTGCTCGCAGAATTTGAGGCCACGATTCAGAAAGACTCTTCCAAGTCTGCTGTGAACGGTGGTGGCGTGCACTCGCTCACGATTCAGAGTATGAATTACCTCTCAATACTGGCAGATTACGTCAACGTTCTCTCTGACATATTCCCGCGCGACTGGATTCCGCCACCGAAGTCATCGTCGCTGCCGGAGTCTTATTTATACAGTCCGGATTCTGATTACTCAGCGTCGACGCCGGCGCTGACGGCGCGCATGGCGTGGCTGATTCTCGTCCTCCTTTGCAAGCTTGACGGCAAAGCGAAGCATTGCAAGGACGTTTCACTGTCGTACTTGTTTCTCGCAAATAATCTATGGTACGTGGTGGCCAGAGTCCGAAGCTCGAACCTGCAGTACGTGCTTGGCGACGATTGGATCACAAAGCACGAAGCTAAGGCGAAGAGGTTCGTCGCGAACTACGAGAAGGTGGCGTGGGGAGAAGTTGTTTCATCGCTGCCGGCAAACCCAGCCGCGACGGAGGCGAGGGTGGTGTTTGAGAACTTCAACCTCAAATTCGAGGAGGCGTATCGGAAGCAGAACTCGTACGTCGTAGCTGACAGAGAACTGCGAGACGAAATAAAAGGTTCGATCGCGAGAAGTATAGTTCCGAGATATCGCGAGTGGTATAATGATCTTCTTGCAACGGTTGGATCAGTGAGGGAGTTGACGGTGACGGTGTATGTCACGTTTACCCCTCAAGACATTGAAAATTACCTCGCTAACCTCTTCCTTTTTGGGAAGTCATCCAGTGCCGTATCGTCCTCCTCGTCGGTAACTTCGTCCCCTCTCCGGCGTTGGAGTTAA 1911 0.516 MRKLCFNPKTPSFALARNSPSSPVSSTSCPTPPRLSFSEPTSIDEDSFIEEAEALILKWNPDSSAYAKVTSLFYQDKIEAKHYINCVNQLHQTMHSLLSHNPSSPKLILAHKLMQIAMKRLKKEFYQILSMNRAHLDPESVSARSSRTSANSSSSDYDDDFAAEDDDIRVAGDSISEVEQVSSAAMADLKLIADCMVSSGYAKECVSVYIIIRKSIIDEGLYRLGVEKLSSSRANKMDWEVLDLKIKSWLEAVRISVRTLFNGERILCDHVFSYSDSVRESCFAEISRDGASLLFGFPELVANTKKSSPEKLFRVLDMHAVSSELWPEIESIFSSDYSSGVRSQALASLQRLTESAQFLLAEFEATIQKDSSKSAVNGGGVHSLTIQSMNYLSILADYVNVLSDIFPRDWIPPPKSSSLPESYLYSPDSDYSASTPALTARMAWLILVLLCKLDGKAKHCKDVSLSYLFLANNLWYVVARVRSSNLQYVLGDDWITKHEAKAKRFVANYEKVAWGEVVSSLPANPAATEARVVFENFNLKFEEAYRKQNSYVVADRELRDEIKGSIARSIVPRYREWYNDLLATVGSVRELTVTVYVTFTPQDIENYLANLFLFGKSSSAVSSSSSVTSSPLRRWS 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02977 636 Pfam Exo70 exocyst complex subunit 247 609 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst1g02977 636 MobiDBLite consensus disorder prediction 140 160 - -
Spst1g02977 636 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Spst1g02977 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 45 612 IPR004140 GO:0000145|GO:0006887
Spst1g02977 636 MobiDBLite consensus disorder prediction 140 157 - -
Spst1g02977 636 Gene3D Exocyst complex component Exo70 66 620 - -
Spst1g02977 636 MobiDBLite consensus disorder prediction 17 40 - -
Spst1g02977 636 SUPERFAMILY Cullin repeat-like 49 612 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02977 Spst-Chr1 38315587 38317497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02977 49 612 EXO70 exocyst subunit family AT3G09520 55.478 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02977 K07195 - gmx:100810548 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02977 1 38315587 38317497 Spst7g00538 7 4948425 4958293 PCT
Spst7g00753 7 7806690 7808588 Spst1g02977 1 38315587 38317497 PCT