Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02962 ATGTCCATGTCGCTTCAACATTCGCTTCTCCTTCTTTTCTCTTCCACATTATTCTTCACCTATTTCCCAGGGTTGGTTGTACCTGCGGAGGTGACGCTGAGCTCGATTGAGATCTTCACAACCCACGAGTGGCTAAAAGTCACTCCAGCTGTCTATTTTCGGTGCAAAGGGGACAAAAAATCTGAATTGCCTGATGTCAAAAAAACCAACGTTTCCTATACTTTTAAGGGTGAAGAGTCTTGGCAGCCTTTGACTATTTTCGATGGTAAAAAGTGTAAACGATGTGGATTCTATGAGGAAGACAAAATTCTTTATGATGATGTGTTTGACGAGTGGGAATTGTGTCCTTCTGATTTTACCGCCCCTGCTGGAAGATACATCCACTTCAAGGAAAAAGAATTCAATGCTACTTTTCTGTGCCCAGGTTGCTTACCTATTTCCGGTGTTTCTGTCTCTGCACCGCCTGCCGAGAATCACGAGCACAGTAAAAAAGGAATGCCTATAGCAGTTATCATTTTGTTAACTATTTTGGTCTTAGCCATTTTGGCTCTGGCAATGATGGGTGTATTCAAGTATTGGCAAAAGAGGAAGAGGGAGCAGGATCAGGCTCGGTTTATGAAGCTATTTGAAGAAGGTGATGACATTGAGGATGAGCTCGGCCTTGGAACTATAATATGA 678 0.4277 MSMSLQHSLLLLFSSTLFFTYFPGLVVPAEVTLSSIEIFTTHEWLKVTPAVYFRCKGDKKSELPDVKKTNVSYTFKGEESWQPLTIFDGKKCKRCGFYEEDKILYDDVFDEWELCPSDFTAPAGRYIHFKEKEFNATFLCPGCLPISGVSVSAPPAENHEHSKKGMPIAVIILLTILVLAILALAMMGVFKYWQKRKREQDQARFMKLFEEGDDIEDELGLGTII 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02962 225 PANTHER EXPRESSED PROTEIN 24 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02962 Spst-Chr1 38192029 38197804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02962 - - gmx:100790395 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02962 1 38192029 38197804 Spst7g01022 7 18223961 18226125 PCT
Spst7g00765 7 7942824 7945629 Spst1g02962 1 38192029 38197804 PCT