Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02958 ATGGTTAGATCCTGCTGGAAGCCAGCTTCGGTGGGTGATGATGGTGATGTGAATGGGAGAGTTGAAGGGCTGCTATGGTACAAGGATTTGGGGAACCATCTTTATGGGGAATTCTCAATGGCTGTTATTCAAGCTAACAGTTCATTGGAGGATCGTAGCCAACTTGAATCTGGACCTTTGACTTCTGACAATTTGGGTCCTCAAGGAACCTTTATTGGTGTATATGATGGTCATGGTGGCACCGCAGCATCACGGTTTGTCAGTGACAATCTCTTCTGCAATTTCAAGAGTTTCGCAGCTGAGCAACAAGGCATATCAGAGAATGTTATACGAAGGGCCTTTTCTGCAACAGAAGAGGGTTTTCTGTCAGTTGTGAAGAAGCAGTGGCTAAGCAAGCCACAGATTGCATCCACGGGTACATGTTGTTTGGCGGGGATAATTTGCAATGGCATGTTATATGTTGCAAATGCAGGAGACTCAAGGGCGGTGCTGGGGAGAGTAGAGAGAGCAACAAGAGAAACAACAGCTATCCAATTATCTGCAGAGCACAACGTTAACATCCTAATGGAGAGAAATGAACTTCGGACAAAGCACCCCTATGATCCACAAATCGTGGTTAAGAAACACAATGTTTGGCGTGTGAAAGGCCTCATACAGGTTTCAAGATCCATAGGTGATGCATATCTGAAGAAAGACGAATTTAACAAGGAGCCTCTACCTCCCAAGTTTAGACTACCTGAACCCTTCTTTAAGCCAATTCTTAGTTATGAACCAGCAATATCAGTTCATAAACTTGGTCCTGAAGATCAATTTCTCATCTTTGCTTCTGATGGTTTGTGGGAGCAACTTAGCAACCAAGAAGTTGTGAATATAGTCAGCAATAACCCACGCAATGGTATTGCTAGGCGACTTGTGAAAGCTGCACTTCGAGAAGCAGCCAGGAAGAGAGAAATGAGAGTTGCAGACCTGCAAAAGATTGAACAAGGAGTGAGGAGACACTTCCACGATGATATTACAGTTATTGTTGTATATCTAAATCCCAAACTCATAGATAATAGTTCTCTATTGGCTTCTCCTCTTTCAATCAGAGGAGGTGGTTCAGCCAACTTTTAG 1113 0.4358 MVRSCWKPASVGDDGDVNGRVEGLLWYKDLGNHLYGEFSMAVIQANSSLEDRSQLESGPLTSDNLGPQGTFIGVYDGHGGTAASRFVSDNLFCNFKSFAAEQQGISENVIRRAFSATEEGFLSVVKKQWLSKPQIASTGTCCLAGIICNGMLYVANAGDSRAVLGRVERATRETTAIQLSAEHNVNILMERNELRTKHPYDPQIVVKKHNVWRVKGLIQVSRSIGDAYLKKDEFNKEPLPPKFRLPEPFFKPILSYEPAISVHKLGPEDQFLIFASDGLWEQLSNQEVVNIVSNNPRNGIARRLVKAALREAARKREMRVADLQKIEQGVRRHFHDDITVIVVYLNPKLIDNSSLLASPLSIRGGGSANF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02958 370 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Spst1g02958 370 Pfam Protein phosphatase 2C 63 314 IPR001932 -
Spst1g02958 370 CDD PP2Cc 35 345 IPR001932 -
Spst1g02958 370 PANTHER PROTEIN PHOSPHATASE 35 344 IPR015655 GO:0004722|GO:0006470
Spst1g02958 370 FunFam Phosphatase 2C family protein 26 355 - -
Spst1g02958 370 SMART PP2C_4 31 343 IPR001932 -
Spst1g02958 370 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Spst1g02958 370 Gene3D - 28 354 IPR036457 -
Spst1g02958 370 SUPERFAMILY PP2C-like 46 346 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02958 Spst-Chr1 38168847 38170723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02958 1 366 PP2C-type Phosphatase Gene Family AT3G12620 66.125 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02958 K01102 - gmx:100815902 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02958 1 38168847 38170723 Spst1g02958 1 38168847 38170723 ECH
Spst1g02958 1 38168847 38170723 Spst7g00770 7 7969766 7972304 PCT