Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02955 ATGAAACAACCAGATGCAAATTTTGAAGGACCATCACTGTTTCCCAGTGACCCTATAAAGAAGGAGTTTGCAGAGGAACTAATAAAGTATGTTGATACTTTTACCAAAGATGTATTTGGGTCATTCAAGGGAGATCCTATAACACAAACCAGGGCTTCATTTGATTATGTGGAGAATGCACTTGGAAAATTTGATGATGGACCTTTCTTCCTTGGAGAATTTAGTTTGGCGGATATTTCCTACATTCCATTCATTGAAAGGTTCCAAATTGTCTTCTCTGAAGTGTTCAAGTATGATATCACTTTTGGAAGACCAAAACTGGCAGCATGGATTGAGAACTTGAACAATAAAGATGCTTATAAGCAAACTGTTCCGATTAAAGATGAAGAATTGTATTCAATGGCAGCAGCAGGTGTTAGGATTCCACCCTTGACATCTACTTCCGAACCACCTCCTCTTTTCGATGGAACTACGAGACTGTACACAAGTTATACAAGCCCTTATGCACAACGTGTATGGATCGTTATGAATTATAAGGGGCTACAAGACCATATCGAACTTGTTCCCATCGATCTTCGGGACATGCCTGCATGGTATAAGGAGAAAGTCTACCCTGGAAATAAGGTGCCATCTTTGGAACACAATGGCAAGGTTTTGGGAGAAAGTCTTGATTTGATAAAATATGTTGATGCCAACTTCGAAGGGCCATCTCTAGTTCCTAGTGATCCTGCAAGGAGAGAATTGGGGGAGCAGTTGATATCTCTCATTGATCCATTGATGAAGGATTTCTACGCTTCATTCAAAAGAGAAGATCCTATGCAGCAAGCTGGTGCTTCTTTTGATTATTTGGAGAATGCTCTTGGAAAATTTGATGACGGGCCCTTTTTTCTTGGTCAATTCAGTTTGGTGGATGCAGCCTATGCTCCATTTGTTGAAAGGTTACAAATTACCTTTTCTGAGGTATACAAGAATGATATCACAGCTGGGAGGCCTAAACTAGCCACATATATTGAGGAGCTGAATAAAGTTGATGCTTATAAACAGACCAAGGTTGAACCGCCCCAGGAATTTGTTGAAGTTTTCAAAAAATGGCTTTTGGCACATTCATCAAAGAGCATTTGA 1122 0.3993 MKQPDANFEGPSLFPSDPIKKEFAEELIKYVDTFTKDVFGSFKGDPITQTRASFDYVENALGKFDDGPFFLGEFSLADISYIPFIERFQIVFSEVFKYDITFGRPKLAAWIENLNNKDAYKQTVPIKDEELYSMAAAGVRIPPLTSTSEPPPLFDGTTRLYTSYTSPYAQRVWIVMNYKGLQDHIELVPIDLRDMPAWYKEKVYPGNKVPSLEHNGKVLGESLDLIKYVDANFEGPSLVPSDPARRELGEQLISLIDPLMKDFYASFKREDPMQQAGASFDYLENALGKFDDGPFFLGQFSLVDAAYAPFVERLQITFSEVYKNDITAGRPKLATYIEELNKVDAYKQTKVEPPQEFVEVFKKWLLAHSSKSI 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02955 373 SFLD Main (cytGST) 159 341 - -
Spst1g02955 373 SUPERFAMILY GST C-terminal domain-like 8 129 IPR036282 -
Spst1g02955 373 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 156 237 IPR004045 -
Spst1g02955 373 Pfam Glutathione S-transferase, C-terminal domain 274 338 - -
Spst1g02955 373 Pfam Glutathione S-transferase, C-terminal domain 48 112 - -
Spst1g02955 373 Pfam Glutathione S-transferase, N-terminal domain 160 236 IPR004045 -
Spst1g02955 373 FunFam Lambda class glutathione S-transferase 235 368 - -
Spst1g02955 373 SUPERFAMILY GST C-terminal domain-like 233 363 IPR036282 -
Spst1g02955 373 FunFam Glutathione S-transferase L2, chloroplastic 132 234 - -
Spst1g02955 373 Gene3D Glutaredoxin 137 234 - -
Spst1g02955 373 SUPERFAMILY Thioredoxin-like 148 238 IPR036249 -
Spst1g02955 373 SFLD Glutathione Transferase (cytosolic) 159 341 IPR040079 -
Spst1g02955 373 FunFam Lambda class glutathione S-transferase 10 136 - -
Spst1g02955 373 Gene3D - 10 136 - -
Spst1g02955 373 Gene3D - 235 369 - -
Spst1g02955 373 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 135 IPR010987 -
Spst1g02955 373 PANTHER GLUTATHIONE S-TRANSFERASE L1 138 365 IPR044629 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02955 Spst-Chr1 38141728 38146494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02955 140 363 Glutathione S-transferase Gene Family AT5G02790 64.286 9.70e-101 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02955 K00799 - gmx:100793025 340.887