Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02932 ATGGGGAGGAAGGGAAACTGGTTTTCAAGCGTGAAGAAAGCTCTCAGCCCCGACTCAAAGGAGAAGAAAGATCAGAAATCAAGTAAATCTAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCAGTCTCATACTCAGAAGCTGATAGCGCACCACCACCATCACAACCTGTTCCTCCATCAGAAGAGATAAAATTAACTGATATTGAAAATGAAGTCAGTCATGATCATGATCATGTTGTTGAAGTCGTAACCTCCGTTGATGCTGAGGAACCTGTTCCTCCTGTTCAGATAGAAACTGTTAGGGTTGGAGCTGCCCGGAATGCTCGTTTTCCTGGTAAACCAAAGGATGAAGTGGCAGCAATCAAAATTCAAACAGCTTTCCGAGGATACTTGGCAAGAAGAGCATTGCGAGCTTTAAGGGGGCTGGTCAGGTTGAAATTATTGATGGAAGGGCCGGTTGTAAAACGCCAAGCCACAAGTACCCTTCGATCTATGCAGACATTGTCTCGCTTGCAGTCTCAGATTCGCTCCAGGAGGATCAGAATGTTAGAGGAGAATCAGGCTCTGCAGAGACAGCTCTTACAGAAGCATGCAAGAGAGCTTGAGAGCTTGCGGATGGGAGAGGAATGGGATGACAGCCTACAATCAAAAGAACAAATCGAAGCCAAGTTACTAAGCAAGTATGAGGCTGCTATGAGAAGAGAAAGAGCATTGGCTTATGCATTCACTCATCAGCAAAACTGGAAGAACTCATCTAGATCTTTAAATCCAATGTTCATGGATCCAGCCTATCCTGCCTGGGGTTGGAGCTGGCTGGAACGTTGGATGGCAGCCCGGCCTTGGGAGAACCGTAGCCAGATGGATAAAGAGGTGAATGACCCTGCATCCGTAAAAAGCTCAAGTCGCAGTATTACTGGCGGAGAAATCAGCAAGTCATTCGCTCGTTTCCAGCTCAATTCTGAAAAGCACTCTCCAACAGCTAGCCAAAATCCTGGCTCACCTAGCTTTCAGTCCACTCCTTCCAAGCGAGTCTCAGCATCTGCTAAGAAACCGAAGAAGGTTAGTCCAAGGGGCAGCTGGATTACGGACGAGGACTCTAAAAGCTTGGTTAGTGTACAGTCAGATCGGTTCCGGAGGCACTCAATCGCTGGTTCATCAGTTAGAGACGATGAGAGCCTTGCTAGCTCTCCGGCAATTCCAAGCTACATGGTGCCAACTCAATCTGCAAAAGCCAAGTCCAGGACACAGAGTCCATTAGCCCCCGAAAATGGAAAAACTGAGAAAGGATCCTTTGGGACTGCAAAGAAGCGGCTATCTTTCCCAGCCTCACCTGCCAGGCCAAGGCGCCATTCAGGTCCACCAAAGGTTGAAATCAGTTTAAATGCCGAGTTAGCTGTGGACAAGGGTGTGGACAGTTGA 1425 0.4751 MGRKGNWFSSVKKALSPDSKEKKDQKSSKSKKKWFGKQKLQTSVSYSEADSAPPPSQPVPPSEEIKLTDIENEVSHDHDHVVEVVTSVDAEEPVPPVQIETVRVGAARNARFPGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQATSTLRSMQTLSRLQSQIRSRRIRMLEENQALQRQLLQKHARELESLRMGEEWDDSLQSKEQIEAKLLSKYEAAMRRERALAYAFTHQQNWKNSSRSLNPMFMDPAYPAWGWSWLERWMAARPWENRSQMDKEVNDPASVKSSSRSITGGEISKSFARFQLNSEKHSPTASQNPGSPSFQSTPSKRVSASAKKPKKVSPRGSWITDEDSKSLVSVQSDRFRRHSIAGSSVRDDESLASSPAIPSYMVPTQSAKAKSRTQSPLAPENGKTEKGSFGTAKKRLSFPASPARPRRHSGPPKVEISLNAELAVDKGVDS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02932 474 MobiDBLite consensus disorder prediction 37 52 - -
Spst1g02932 474 MobiDBLite consensus disorder prediction 1 63 - -
Spst1g02932 474 PANTHER IQ-DOMAIN 5-RELATED 1 455 - -
Spst1g02932 474 Gene3D - 97 146 - -
Spst1g02932 474 Pfam IQ calmodulin-binding motif 121 139 IPR000048 GO:0005515
Spst1g02932 474 MobiDBLite consensus disorder prediction 322 474 - -
Spst1g02932 474 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Spst1g02932 474 SMART iq_5 117 139 IPR000048 GO:0005515
Spst1g02932 474 MobiDBLite consensus disorder prediction 322 347 - -
Spst1g02932 474 MobiDBLite consensus disorder prediction 401 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02932 Spst-Chr1 37947175 37950247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02932 1 459 IQD Protein Family AT5G03040 54.219 7.30e-149 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02932 - - gmx:100800080 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02932 1 37947175 37950247 Spst1g02932 1 37947175 37950247 ECH
Spst1g02932 1 37947175 37950247 Spst7g00797 7 8310726 8313932 PCT