Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02922 ATGAAACACGAGTTCTCTGCTTCAGCCATGGCCGATGATTTCGAGTTCGCAGATAAAGTTCCTCCTGCGTTCGACCGAGTGGTACATTTCCAAATACTGTTGCAAACTTTTAATTTCATCATCGTTTATTACTTGCATCTCATCTTAATCGATTCCTGCGCAATGTTCCTCCTCCCACTTCACATCAATAATTTGACATATTGGGGTGGATCCCAAGGATTCAACCCAGGCTTAATTGTCCTCCTGGTTGTTGGTGGGTTGCTGTTGACATTCCTCATTGGGAATTATGTGCTCTACACGTATGCACAGAAGACCCTCCCTCCAAGAAAAAAGAAGCCTGTTTCAAAGAAAAAGATGAAAAAGGAGAGACTGAAGCAAGGTGTCTCTGCACCTGGAGAGTAG 402 0.4378 MKHEFSASAMADDFEFADKVPPAFDRVVHFQILLQTFNFIIVYYLHLILIDSCAMFLLPLHINNLTYWGGSQGFNPGLIVLLVVGGLLLTFLIGNYVLYTYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02922 133 PANTHER DNA-BINDING PROTEIN S1FA2 63 133 IPR006779 GO:0003677|GO:0005634|GO:0006355
Spst1g02922 133 MobiDBLite consensus disorder prediction 108 133 - -
Spst1g02922 133 MobiDBLite consensus disorder prediction 109 123 - -
Spst1g02922 133 Pfam DNA binding protein S1FA 71 133 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02922 Spst-Chr1 37765016 37767431 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Spst1g02922 S1FA 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02922 - - gmx:100499820 125.176