Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02905 ATGAAGATCCCTTGTTCTTTTTGTGCTTGTTTCTCAGCATCGGTCCAAGAACAACAGACCAAGCAAGAAGAGCCAGGTGAAGATAATGACGGAAACTTTCGCATATTCACTTACAGAGAATTGAATTCTGCCACACGGGGCTTTCATCCCTCGGAAAAGATTGGAGAAGGAGGCTTTGGCTCTGTGTACAAGGGGGAGCTTCGGGATGGAAGTTTGGTGGCCGTGAAAGTGCTTTCGATTGAGCTAGATTCCCTGAGAGGAGAGAGGGGGTTTGTAGCAGAATTGAATACACTAGCAAATGTCAAGCACCAAAATCTAGTTACTCTTCGAGGGTGTTGTGTAGAAGGAACCCACAGATACATAGTCTACGATTACATGGAAAATAATAGCCTTCGTCACACTTTCTTAGGTGATCTTCAGATTATTTTCTAA 432 0.4375 MKIPCSFCACFSASVQEQQTKQEEPGEDNDGNFRIFTYRELNSATRGFHPSEKIGEGGFGSVYKGELRDGSLVAVKVLSIELDSLRGERGFVAELNTLANVKHQNLVTLRGCCVEGTHRYIVYDYMENNSLRHTFLGDLQIIF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02905 143 ProSiteProfiles Protein kinase domain profile. 48 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02905 143 SUPERFAMILY Protein kinase-like (PK-like) 31 134 IPR011009 -
Spst1g02905 143 Pfam Protein kinase domain 49 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02905 143 FunFam Serine/threonine-protein kinase receptor 17 125 - -
Spst1g02905 143 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Spst1g02905 143 Gene3D Phosphorylase Kinase; domain 1 8 125 - -
Spst1g02905 143 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02905 Spst-Chr1 37655754 37656422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02905 36 138 Receptor kinase-like Gene Family AT1G56120 55.340 2.23e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst1g02905 Pkinase 5.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02905 - - gmx:100785251 216.468