Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02879 ATGACCAAGTACTTCTGTTTTTGGGATTTACTGAAAAATAAAGATCATCGAAAATGGAATGGAATATGGATGGAGGTTTTGGTTGAGATGAAGCATACAGCACTACATGTTGATGTATATTTGAAATGCTATTCTGCTGGTTTAATTCTTCAAAGCTTTCTGTGTTTTGAGTTCAAAGATGATGCATATAGGATGGGGTTAACTTCGTCTTCAAAATGGGGGGAGCAGTTATTACTATTTGGTCCTCTGAGCATGGGTAAAACATGTACAACTTCTTCTTGGGGACTGTGGATGGGAGGGCTTGGAGTACTGGAGCCTGTGGTGAGGAAACTACAAACCTCTTTTTCACGTTCAAAAGGGGTGAAGCAGGGCCATTTTGTCGTGATTGCAACACAAGGGTGGAAACCAGAAAGATTCTTTATTGAATTGGGGTATTTAGATCACCCTGACTTTGTGAAGTTGTTAAAGCAAGCTGAAGAAGAGTTCGGGTTCTCTCAGGTGGGAGCACTAGAAATTCCATGCGAACCAGATGACCTGAAGAGAATCATTGGAAGGAAAAAGAATAGGAACAAGGGCATTACCTGTTGGGTCAAAGGGATAAGAGTTGCATGA 612 0.4118 MTKYFCFWDLLKNKDHRKWNGIWMEVLVEMKHTALHVDVYLKCYSAGLILQSFLCFEFKDDAYRMGLTSSSKWGEQLLLFGPLSMGKTCTTSSWGLWMGGLGVLEPVVRKLQTSFSRSKGVKQGHFVVIATQGWKPERFFIELGYLDHPDFVKLLKQAEEEFGFSQVGALEIPCEPDDLKRIIGRKKNRNKGITCWVKGIRVA 203
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02879 203 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 114 181 IPR003676 GO:0009733
Spst1g02879 203 Pfam Auxin responsive protein 116 183 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst1g02879 Spst-Chr1 37414259 37416194 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02879 114 192 Calmodulin-binding Proteins AT2G24400 39.241 2.39e-11 58.5