Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02860 ATGTTTAACCCCAAAACCGAACAACATCAGTGCAAAATGGTGGTTGGAGAGTTCGCAGGTGGTGGTTTGAGAGGAGTGAAGAGCTTGAGCTACCATGTTATCACCGGGCGTTGGTTCATGTTCTATGCATCTTTGCTCATCATGGCTGCTGCGGGGGCAGTTTATATTTTTGGCATGTACTCTAACGAGGTCAAAACCTCTTTGGGGTATGACCAAACCACTCTCAACTTGCTCAGCTTCTTCAAAGACATGGGTGCCACAGTTGGAATCATATCTGGTTTGATCAACGAGGTAACACCACCCTGGGTGGTACTCTCAATTGGGGTCCTTATGAACTTCTTTGGCTACTTCATGATATGGCTTGCAGTCTCTGGCCGCATTGCCAAACCACAGGTTTGGCAAATGTGTCTCTACATTTGCATTGGTGCAAATTCTCAAACCTTTGCTAACACTGGTGCTTTAGTCACATGTGTCAAGAACTTCCCAGGAAGCCGTGGCAGTGTTTTAGGCCTACTCAAAGGTTACCTTGGGCTAAGTGGTGCCATCATGGCTCAGTTCTACCATGCTTTCTATGGTGATCACAACCCTCAAGCTCTTATCTTACTCATTGCGTGGCTTCCTGCTACTGTTTCCTTCATTTTCCTCCCAACAATTCGGATATTCGCCAACACAGTTCACCAACCCAACGAGAACAAGGTTTTCTACTTCCTTCTATATATTTCACTTGCCTTTGCAGGGTTTCTCATGGCTTTGATCATATTGCAAAACAAGCTCACTTTTACAAGGCCCGAATTCGTAGCCGATGGGGTTGTGGTTTTTTCCCTTCTTCTTCTCCCACTTGTTGTGGTATTTCGAGAGGAAATAAACCAATTGAAAGCCGAAACGCAAGGTTTGACCGATTCAACACCCCAGTTGAAAGTAGTCACTGAAAATTTTCCACCTCCAAAAGTAGAGCAAGAAGTACCAGCAACCACAAGTTCGCACGAGAAAAGTTCTTGTTTCAGGAACATACTCAACCCCCCAAAGAGGGGAGAAGACTACACCATTTTGCAAGCACTTTTCAATATTGACATGCTGATTCTGTTCATTGCAACAATATTTGGTGCTGGCGGAGCATTAACAGCCATAGACAATCTAGGACAGATTGGACGCTCATTGGGATACCCCAGGAAGAGCATCACAACATGCGTGTCCTTATTGAGCATATGGAACTACTTGGGACGGGTAGTTGCAGGTTTTGCTTCTGAAATATTGTTGACCAAATACAAAGTCCCTCGTCCCTTCATGCTCACTCTAGTTATGCTTCTCTCTTGTATTGGCCATATTCTGATAGCCCTTGGTGCCCCAAACTCCCTCTACTTGGCTTCCGTGATTATAGGGTTCTGTTTGGGAGCTGAGTGGCCGCTAATGTTTGCGATCATATCAGAAATATTTGGCCTTAAACGTTACTCCACGTTGTATAACTTTGGAGCCGTGGCAAGCCCTGTTGGGTCTTACATTCTGAACGTGAGAGTGACAGGTGTTCTGTATGATAAAGAGGCTTTGAGACAGTTGAAGTCCAAAGGAGTCTCGAGACAAGCGGGGAAGGAGCTTGACTGCGTTGGAGTACAGTGTTACAGAATGGCGTTTATCATAATCACGGTTGCGACGCTGTTTGCATGCTTTGTTTCGTTTGTTTTGGTGCTGAGGACTAGAAAATTTTACAAAGGGGATATCTATAGAAAGTTCAGAGTGGAACTTGTAACCGAGGAGAACGAAATCGGGATCACCAAAACTGGTAACAGTGGCTTCGGAGAACAAGATAAGGAGAATAAAGAATGA 1821 0.4487 MFNPKTEQHQCKMVVGEFAGGGLRGVKSLSYHVITGRWFMFYASLLIMAAAGAVYIFGMYSNEVKTSLGYDQTTLNLLSFFKDMGATVGIISGLINEVTPPWVVLSIGVLMNFFGYFMIWLAVSGRIAKPQVWQMCLYICIGANSQTFANTGALVTCVKNFPGSRGSVLGLLKGYLGLSGAIMAQFYHAFYGDHNPQALILLIAWLPATVSFIFLPTIRIFANTVHQPNENKVFYFLLYISLAFAGFLMALIILQNKLTFTRPEFVADGVVVFSLLLLPLVVVFREEINQLKAETQGLTDSTPQLKVVTENFPPPKVEQEVPATTSSHEKSSCFRNILNPPKRGEDYTILQALFNIDMLILFIATIFGAGGALTAIDNLGQIGRSLGYPRKSITTCVSLLSIWNYLGRVVAGFASEILLTKYKVPRPFMLTLVMLLSCIGHILIALGAPNSLYLASVIIGFCLGAEWPLMFAIISEIFGLKRYSTLYNFGAVASPVGSYILNVRVTGVLYDKEALRQLKSKGVSRQAGKELDCVGVQCYRMAFIIITVATLFACFVSFVLVLRTRKFYKGDIYRKFRVELVTEENEIGITKTGNSGFGEQDKENKE 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02860 606 Gene3D MFS general substrate transporter like domains 352 568 IPR036259 -
Spst1g02860 606 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 38 574 - -
Spst1g02860 606 SUPERFAMILY MFS general substrate transporter 38 569 IPR036259 -
Spst1g02860 606 CDD MFS_Mch1p_like 36 554 - -
Spst1g02860 606 Pfam Major Facilitator Superfamily 361 564 IPR011701 GO:0022857|GO:0055085
Spst1g02860 606 Pfam Nodulin-like 37 284 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02860 Spst-Chr1 37201158 37202978 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02860 26 604 Nodulin-like Gene Family AT2G39210 60.544 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02860 - - gmx:100798313 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02860 1 37201158 37202978 Spst10g01486 10 15501496 15503304 ECH
Spst1g02860 1 37201158 37202978 Spst1g02860 1 37201158 37202978 ECH
Spst1g02860 1 37201158 37202978 Spst7g01019 7 18156652 18158406 PCT