Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02858 ATGGCGAAATCTAAAGCGTTGGATTGCACATTTATCGTACGAAGTGATGGCCGCTTTCAGTTTACCATTGATTCAAGGCTCACCGATAGTGGCTGCTTAGGACCACCGTTCAGAGTGCTCTTTCTCTATATATACGTGGTTCTCGATAGCCTCATCTCACTTCATTCAGCCCCTTTTATCACACGCCACAAGAAAGTGTTTGGTCCCAAAATACAACATCAGTGTAAAATGGTGGTGGCAGAGTTCGGTAGTGGTGGTTTGAGAGGAATGAAGAGTTTCAGCTACCATGTTATCACCGGGCGTTGGTTCATGCTGTTTGCATCTCTACTTATCATGTCCGTTGCAGGGGCAACATATATGTTTGGAATATACTCTAACGAGGTCAAAACCTCTTTAGGGTACGACCAGTCCACTCTCAACTTGCTCAGCTTCTTCAAAGACCTAGGTGGCAACGTTGGGGTCATATCCGGGTTGGTCAACGAGATAACACCACCCTGGGTGGTACTCTCAATTGGGGTCCTCATGAACTTCTTTGGTTACTTCATGATATGGCTTGCAGTCTCTGGCCGCACTGCCAAACCACAGGTTTGGCAAATGTGTCTCTACATTTGCATTGGTGCAAATTCTCAAACCTTTGCCAACACTGGTGCTTTAGTCACATGTGTCAAGAACTTCCCAGGAAGCCGTGGCAGTCTTTTAGGTCTACTCAAAGGCTATGTTGGTCTAAGTGGTGCCATCATGACCCAGCTCTACCATGCCTTATATGGTGATCACAACCCTCAGGCCCTTATCTTACTCATTGCTTGGCTCCCTGCTGCTGTTTCCTTCCTTTTCCTTCCAACAATTCGGATATTCAACACAGTCCACCAACCCAGGAACAACAGAGTTTACTACCACCTTCTATATATTTCACTTTGCCTTGCAGGGTTTCTCATGGTTTTGATCGTTGTACAAAACAAGCTTAGTTTCTCAATGATTGAGTACAGAGTCGATGGCCTTGTGGTTTTCTCCTTTCTTCTTCTTCCACTCGCTGTGGTATTTAGAGAGGAGGTAAACCATTTAAAAACGCAAGGCTTGATCGATTCGGCACCCGAGTTGAAAGTAGTCACTGAAGTTATTCCACCTCCAAACGTAGAGCAAGAACTACCAACTACAACAAGTTCAGAAGAAAAATTTTCTTGTTTCAGGAACATACTCAACCCCCCAAAGAGGGGAGAAGACTACACCATTTTGCAGGCACTTTTCAGCATTGACATGCTGATTTTGTTCGTTGCAACAACGTTTGGTACTGGCGGAACATTAACAGCCATAGACAATCTAGGACAGATTGGAAACGCATTGGGGTACCCGAGTAAGAGCACGACAACCTTTGTGTCCTTGGTGAGCATATGGAACTACTTAGGAAGAGTAGCCGCAGGTTATGCCTCTGAAATCTTCTTAACCAAATACAAAGTCCCTCGTCCCTACATGGTCACTCTAGTATTGCTTATCTCATGTGTTGGCCATATTCTGATAGCCCTTGGCATCCCAAACTCTCTCTACCTGGCTTCAGTGATTATTGGATTTTGTTTTGGAGCTCAGTGGCCACTAATGTTTGCAATCATATCAGAAATATTTGGCCTTAAATACTACTCCACGTTATACAACTTAGGAGCCGCGGCAAGCCCTGTTGGGTCTTACATTCTAAACGTGAAAGTGGCTGGTGTTTTGTATGATAAAGAGGCTTTGAAACAACTGAAGGCCAAAGGACTGACAAGAGAAGCAGGGAAGGACCTAACTTGTGTCGGAGTGCAATGCTACAGAATGGCTTTTATCATAATCACGGCTTCAACGTTGGTTGGGTGTTTAGCCGCGCTCATTTTATCTCTGAGAACTAGAAAGTTTTACAAAGGGGATATCTATAGAAAGTTTAGAACGGAACATGAAACAACAGAGAATGAGATGGAGATTACAGAGACAAAAACAGAAGTAAACGCAGTAAATGGTTGA 1989 0.4414 MAKSKALDCTFIVRSDGRFQFTIDSRLTDSGCLGPPFRVLFLYIYVVLDSLISLHSAPFITRHKKVFGPKIQHQCKMVVAEFGSGGLRGMKSFSYHVITGRWFMLFASLLIMSVAGATYMFGIYSNEVKTSLGYDQSTLNLLSFFKDLGGNVGVISGLVNEITPPWVVLSIGVLMNFFGYFMIWLAVSGRTAKPQVWQMCLYICIGANSQTFANTGALVTCVKNFPGSRGSLLGLLKGYVGLSGAIMTQLYHALYGDHNPQALILLIAWLPAAVSFLFLPTIRIFNTVHQPRNNRVYYHLLYISLCLAGFLMVLIVVQNKLSFSMIEYRVDGLVVFSFLLLPLAVVFREEVNHLKTQGLIDSAPELKVVTEVIPPPNVEQELPTTTSSEEKFSCFRNILNPPKRGEDYTILQALFSIDMLILFVATTFGTGGTLTAIDNLGQIGNALGYPSKSTTTFVSLVSIWNYLGRVAAGYASEIFLTKYKVPRPYMVTLVLLISCVGHILIALGIPNSLYLASVIIGFCFGAQWPLMFAIISEIFGLKYYSTLYNLGAAASPVGSYILNVKVAGVLYDKEALKQLKAKGLTREAGKDLTCVGVQCYRMAFIIITASTLVGCLAALILSLRTRKFYKGDIYRKFRTEHETTENEMEITETKTEVNAVNG 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02858 662 Coils Coil 634 654 - -
Spst1g02858 662 CDD MFS_Mch1p_like 100 615 - -
Spst1g02858 662 Pfam Nodulin-like 101 347 IPR010658 -
Spst1g02858 662 SUPERFAMILY MFS general substrate transporter 100 628 IPR036259 -
Spst1g02858 662 Gene3D MFS general substrate transporter like domains 411 628 IPR036259 -
Spst1g02858 662 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 102 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02858 Spst-Chr1 37190646 37192946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02858 90 640 Nodulin-like Gene Family AT2G39210 64.057 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02858 - - gmx:100797779 994.571