Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02824 ATGTCTATTTTTCTGACAATGGGATTTGAACAGGACACAGTTCTGGTTCCTCCTTGGCTGGAACAACTTCTTCACACACCTTTCTTCAATGTGTGCCGGATTCACACAGACGCAGCTAGGAGCGAATGTAACATGTTTTGTCTAGATTGCAATGGCGAAGCCTTTTGTTTCTACTGTCGTTCTTCTCGACACAAAGATCATCGGGTGATTCAGATAAGAAGATCTTCATATCACGATGTAGTGAGGGTGGCTGAAATTCAGAAGGTGTTGGACATAAGTGGAGTGCAGACATATGTGATAAACAGTGCTCGAGTTTTGTTCTTGAATGTGAGGCCTCAACCAAAATCTGGGAAAGGAGTAGCTCATATTTGTGAGATTTGTGGAAGGAGTCTCCTGGACCCATTTCGCTTCTGTTCTTTGGGATGTAAGCTTGAAGGAATAAAGAAAAATGGGGATGCAAGCTTTGCTTTGGATGGTAGGAATGAAGAATTGACCATGGATACAACTTCAACTTCAAGGGGATCAGTCTCATCAAGACAGCAAGAAGAAGGATTGCGTGAAGGTTCAACACAAGACATGTATCCTCCTCAACCTCCTTCAAACGCAAGAAGAAGGAAAGGAATACCTCATAGGGCTCCTTTTGCTTCCTAA 651 0.4301 MSIFLTMGFEQDTVLVPPWLEQLLHTPFFNVCRIHTDAARSECNMFCLDCNGEAFCFYCRSSRHKDHRVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLEGIKKNGDASFALDGRNEELTMDTTSTSRGSVSSRQQEEGLREGSTQDMYPPQPPSNARRRKGIPHRAPFAS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02824 216 Pfam PLATZ transcription factor 73 144 IPR006734 -
Spst1g02824 216 MobiDBLite consensus disorder prediction 163 216 - -
Spst1g02824 216 MobiDBLite consensus disorder prediction 163 184 - -
Spst1g02824 216 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 13 214 - -
Spst1g02824 216 SUPERFAMILY B-box zinc-binding domain 29 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02824 Spst-Chr1 36755794 36756972 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Spst1g02824 PLATZ 6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02824 - - gmx:100803083 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02824 1 36755794 36756972 Spst1g02824 1 36755794 36756972 ECH
Spst1g02824 1 36755794 36756972 Spst7g00976 7 16520516 16521687 PCT