Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02814 ATGATTGCTGAATCAAACATGAGACCCGGCTTCCGTTTTTGCTATGCCTATGCCTTTCTTCTTTTCCTTCTCCTCACCCATCACACTACTTCTTCTCAGAAGACTTGTCCAAACTGTGGCTCTGTGCAAGTTCCATACCCTTTGAGCACACATCCAAGTTGTGGTGATCCATTCTACAAGCTTCGTTGTGATTCCCACTCAGACAGGCTCTACTTCGACACCCTCAATGGAAGTTCCTATCTCGTTCTCCGAATCATGTCTTCAATCCAGCGCATGGTGGTAGATCCATCACCTTGGTTACCAGGTTTGTGTGTTACTCAAGACATGGTAAGAAGCAATGGTATATGGTTGAACCAGTCACTCCCTTTCAACATAACTTCCTCCAACACAGTGTTCCTCCTTAATTGCTCCCCGCGCCTCTTAGTTTCTCCTCTCAACTGCACTTCTTCTAGTGTTTGCCATCGTTACTTGGGGAGTTCAGGTCATGTTGACACAAAACGAGCACTTGAGTGTGCAAGTGGTGTTCACCCTTGTTGCACTTTTCTAGCTGGTGGTATACCTTCAGCTTACAGGATCAGGCTTCATGATTCTGGCTGCAAAGCATTCAGAAGCATCCTTCATTTGAATCAAGACAAGCCTCCGAATCAGTGGGAGGAAGGGCTTGAAATTCAATGGGCTCCTCCACCTGAACCAGTTTGCAAGACACAAAGGGACTGCTCTGGAGACTCGACGTGTTCCCCTTCTGGTAGAAATGGCCTATTTCGCTGTCTTTGTAATGGGGGACACAGTTGGAACTCTTTTGTTGCAACCTGCGTGAGGTATGAGAGAAAACCCAAATGGAAAACCAGCTTGGTGGTGTCAATAGGGGTTGTTGTTACTTTTTTCTCTCTTGTTCTAGTTCTGACCATCATCACAAAGTCCTGCAAAATCTCTACCCATCGAGAGAATCAGGCCAAGGAAAGAGAAGACAAGCTGAAATCAAGTGCTGGGGAGAAGCCTTGTAGGATGTTTCAACTGAAAGAGGTGAAGAAAGCAACAAATGGTTTTTCCCAAGAGAAGTTCTTGGGGAGTGGTGGCTTTGGGGAAGTTTTCAAAGGTGAGTTACAAGATGGAACATTAGTTGCTGTGAAGAAAGCTAGAGTGGGAAACCTGAAAAGCACCCAACAAGTGCTTAATGAGGTTGCAATACTTTCTCAAGTCAATCATAAGAACTTGGTCAGGCTCTTGGGATGCTGCGTGGAATCTGAGCTACCATTGATGATATATGAGTATATCTCAAATGGGACCCTCTATGACCATCTTCATGGTAGATATTGTGCCAACTTTCTTGACTGGAAAACAAGGCTCAAGGTTGCTTTTCAAACTGCAGAAGCATTAGCTTACTTGCATTCTGCTGCACACACGCCCATTTACCATAGAGATGTTAAGTCAACAAACATACTGTTGGATGATGATTTCAATGCCAAGGTCTCAGATTTTGGACTCTCCAGATTGGCTAGCCCGGGACTCAGTCACGTGTCAACATGTGCTCAGGGAACGTTGGGGTACTTGGATCCTGAATATTACCGCAACTACCAGTTAACAGATAAAAGCGATGTTTATAGTTATGGGGTTGTGTTGCTAGAGCTTTTGACTTCACAGAAAGCGATTGACTTCAATCGTGATGAAGATGATGTCAACCTAGCAATTCATGTGAATCAACATACGAGCAATGGTACAATCATGGAATTGGTGGATCAAAGGCTTCTTTCCGTGGAGACCTTGGGGGATAAAATGTTCACGAGCATAAAACTCTTCTTGGATCTTGCTCTTGAATGTCTAAGAGAGAAGAAAGGTGAAAGGCCTAACATGAGGGATATTGTTCAACGCCTACTATGCATAATTAGGATTGTAGAACATGAGTGA 1905 0.4425 MIAESNMRPGFRFCYAYAFLLFLLLTHHTTSSQKTCPNCGSVQVPYPLSTHPSCGDPFYKLRCDSHSDRLYFDTLNGSSYLVLRIMSSIQRMVVDPSPWLPGLCVTQDMVRSNGIWLNQSLPFNITSSNTVFLLNCSPRLLVSPLNCTSSSVCHRYLGSSGHVDTKRALECASGVHPCCTFLAGGIPSAYRIRLHDSGCKAFRSILHLNQDKPPNQWEEGLEIQWAPPPEPVCKTQRDCSGDSTCSPSGRNGLFRCLCNGGHSWNSFVATCVRYERKPKWKTSLVVSIGVVVTFFSLVLVLTIITKSCKISTHRENQAKEREDKLKSSAGEKPCRMFQLKEVKKATNGFSQEKFLGSGGFGEVFKGELQDGTLVAVKKARVGNLKSTQQVLNEVAILSQVNHKNLVRLLGCCVESELPLMIYEYISNGTLYDHLHGRYCANFLDWKTRLKVAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDDFNAKVSDFGLSRLASPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFNRDEDDVNLAIHVNQHTSNGTIMELVDQRLLSVETLGDKMFTSIKLFLDLALECLREKKGERPNMRDIVQRLLCIIRIVEHE 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02814 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Spst1g02814 634 SMART serkin_6 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02814 634 Gene3D Transferase(Phosphotransferase) domain 1 425 632 - -
Spst1g02814 634 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Spst1g02814 634 Gene3D Phosphorylase Kinase; domain 1 308 424 - -
Spst1g02814 634 Pfam Protein kinase domain 350 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02814 634 CDD STKc_IRAK 355 624 - -
Spst1g02814 634 ProSiteProfiles Protein kinase domain profile. 349 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02814 634 SUPERFAMILY Protein kinase-like (PK-like) 327 624 IPR011009 -
Spst1g02814 634 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 322 424 - -
Spst1g02814 634 FunFam Wall-associated receptor kinase-like 20 425 634 - -
Spst1g02814 634 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 627 IPR044652 GO:0004672
Spst1g02814 634 Pfam Wall-associated receptor kinase galacturonan-binding 36 93 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02814 Spst-Chr1 36673437 36675341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02814 36 634 Receptor kinase-like Gene Family AT5G02070 47.218 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Spst1g02814 Pkinase 4.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02814 - - gmx:100804678 1161.36