Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02801 ATGAAAGACCCTTCTTCCATAAACCTATCACTGGTGTTGTCCTTGGCATTGGCCTTCACCATCCTGTGTGTTGCAGAGAGTGCATGGCAAAATGATACACTCGCCCTCACCCAATTCCGCATCCAAACCGACACACATGGTAACCTGCTTTCCAACTGGACCGGCGGCGACGCCTGCTCCGCCGCTTGGCGCGGCGTGGAATGCTCCCCAAACGGCAGAGTTGTGGGCCTCTCTCTCCCTTTCCTCAACCTTCGTGGCCCAATTGATTCTCTCTCCTTACTCGTCTACCTCCGCTTCCTCGACCTCCACGAAAACCGCTTAAACGGCACCGTTTCTCCTCTCTTAAACTGCACCGCCCTCGAACTCCTTTACCTCTCCCGCAACGACTTCTCCGGCGAGATTCCGCCGCAGATATCCTCCCTCCGCCTCCTCCTCCGCCTTGACATCTCCGACAACAATATCCGCGGCCCAATTCCCAACCAACTCGCCAAACTAACCCACCTCCTAACTCTTCGGTTACAGAACAATGCCCTCTCCGGCCACGTCCCCGACCTTTCCGCTTCCCTCCTCAACCTCACCCAACTCAACGTCACCAACAACGAACTCCGCGGCCACGTCCCCGATTCCATGCTCACCAAATTCGGCAATGCCAGCTTCTCCGGAAACCACGATCTATGTGGGTCCACCCCGCTACCCAAATGTTCGAAAACTGAACCAGACACCGAGACAACAATAACCGTTCCTTCAAAACCGAGCTCGTTCCCTCAAACAAGCAGTGTAACTCTCTCTGACTCTCCAAAGAAGAAAGGGCTGGGTGCAGGTGTCATCGTGGCGATTGTGGTGGCGGCTTGCGTGGCGGTGCTGGTAGCGATGTCGTTCGTGGTGGCGCACTGCTGCGCAAGGGGAGGGGAAGGCTCTGGGTCGGCGGTGGGAAGCGAGAGTGGGAAGAGGAAGAGCGGGAGTAGTTCTGGGAGCGAGAAGAAGGTGTATGGGAATGGCGGGAACTTCGATAGAGATAGCGATGGGACGAACACTGAGACGGAGCGAAGCAAGCTCGTGTTTTTCGATAGAAGGAACCAATTTGAGTTGGAGGATCTGCTTCGAGCTTCGGCGGAGATGCTGGGGAAAGGATGCTTGGGAACGGTTTACAGAGCGGTGCTCGACGATGGCTGCACCGTCGCAGTGAAGAGACTCAAAGACGCAAACCCATGCGAGAGAAACGAGTTTGAACAGTACATGGACGTTGTAGGGAAGCTCAAACACCCCAACTTAGTTAGACTCCGAGCTTATTACTATGCCAAGGAAGAAAAGCTTCTTGTGTATGATTATCTCCCCAATGGAAGCTTGCATGCTCTTCTTCATGGTAACCGTGGACCTGGAAGGATTCCATTGGATTGGACAACGAGGATAAGCTTGGTGTTAGGTGCGGCTAGAGGGTTGGCTAGGATTCATGCAGAGTACAACGCGTCCAAGATACCTCACGGGAACGTGAAATCCTCCAACGTGCTTCTCGACAAAAACGGCGTCGCTTTGATCTCAGACTTCGGGTTATCGCTGCTGTTGAACCCCGTTCACGCGATCGCGCGGTTAGGGGGATACAGAGCGCCAGAACAGGTTGAAGTGAAGAGGCTGTCGCAGGAGGCTGACGTGTACGCTTTCGGCGTGCTGGTGTTGGAGGTGCTGACGGGGAGGGCACCGTCGACGCAGTACCCTGGTTCCGCGGCTCGTCCGCGCGTGCAGGATGAAGGTGAGGTGGATCTTCCGAAGTGGGTCCGGTCTGTGGTGAAGGAGGAGTGGACCGCGGAGGTGTTCGACGAGGAGCTGTTGAGGTACAAGAACATCGAGGAGGAGTTGGTGGCGATGTTGCACGTGGGAATGGCGTGCGTGGCGATGCAACCGGAGAAGAGGCCGAGTATGTTGGAGGTTGTGAAGATGGTTGAGGATCTGAGGGTGGAACAGTCTCCTCTTGGAGAGGATTATGACGAGGCACGGTCACGCACTTCGCTTTCGCCTTCGCTTCCCACCACTGAAGATGGCCTTGCTTAA 2046 0.5547 MKDPSSINLSLVLSLALAFTILCVAESAWQNDTLALTQFRIQTDTHGNLLSNWTGGDACSAAWRGVECSPNGRVVGLSLPFLNLRGPIDSLSLLVYLRFLDLHENRLNGTVSPLLNCTALELLYLSRNDFSGEIPPQISSLRLLLRLDISDNNIRGPIPNQLAKLTHLLTLRLQNNALSGHVPDLSASLLNLTQLNVTNNELRGHVPDSMLTKFGNASFSGNHDLCGSTPLPKCSKTEPDTETTITVPSKPSSFPQTSSVTLSDSPKKKGLGAGVIVAIVVAACVAVLVAMSFVVAHCCARGGEGSGSAVGSESGKRKSGSSSGSEKKVYGNGGNFDRDSDGTNTETERSKLVFFDRRNQFELEDLLRASAEMLGKGCLGTVYRAVLDDGCTVAVKRLKDANPCERNEFEQYMDVVGKLKHPNLVRLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYNASKIPHGNVKSSNVLLDKNGVALISDFGLSLLLNPVHAIARLGGYRAPEQVEVKRLSQEADVYAFGVLVLEVLTGRAPSTQYPGSAARPRVQDEGEVDLPKWVRSVVKEEWTAEVFDEELLRYKNIEEELVAMLHVGMACVAMQPEKRPSMLEVVKMVEDLRVEQSPLGEDYDEARSRTSLSPSLPTTEDGLA 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02801 681 MobiDBLite consensus disorder prediction 234 265 - -
Spst1g02801 681 MobiDBLite consensus disorder prediction 303 344 - -
Spst1g02801 681 SUPERFAMILY Protein kinase-like (PK-like) 372 646 IPR011009 -
Spst1g02801 681 FunFam pollen receptor-like kinase 1 338 443 - -
Spst1g02801 681 Gene3D Transferase(Phosphotransferase) domain 1 444 666 - -
Spst1g02801 681 SUPERFAMILY L domain-like 30 210 - -
Spst1g02801 681 Gene3D Ribonuclease Inhibitor 111 236 IPR032675 -
Spst1g02801 681 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Spst1g02801 681 MobiDBLite consensus disorder prediction 230 268 - -
Spst1g02801 681 MobiDBLite consensus disorder prediction 312 329 - -
Spst1g02801 681 Pfam Protein kinase domain 372 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02801 681 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 444 658 - -
Spst1g02801 681 CDD STKc_IRAK 374 649 - -
Spst1g02801 681 Gene3D Ribonuclease Inhibitor 25 110 IPR032675 -
Spst1g02801 681 ProSiteProfiles Protein kinase domain profile. 368 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02801 681 Gene3D Phosphorylase Kinase; domain 1 338 443 - -
Spst1g02801 681 FunFam Nuclear pore complex protein NUP107 29 184 - -
Spst1g02801 681 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 651 IPR046959 -
Spst1g02801 681 MobiDBLite consensus disorder prediction 654 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02801 Spst-Chr1 36581492 36583613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02801 30 677 Receptor kinase-like Gene Family AT2G36570 65.522 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst1g02801 Pkinase 2.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02801 - - gmx:100808402 1110.13