Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02799 ATGGAACCCAATGCACTAGGTTGTGGTATATTTCCTAACATAGGTAGTGGTTTGCTAGGAGTAGAAAACCTTCAAAACCAGCAAAACCCTCCTCACCCTTTGCACCACCCCCAAATGGTTTCCTATGCCTCTCAACATGACACTGACACACATCAACAACACCCACCACAATCAATCAAACACGGCTACAACTATTCAGCCACGAAAACCAACAAGTTACAAATCACACTCAGTGATGAAGATGAGCCCGGGTTCACAGCAGAAGACTCTGGCGACCCCAAGAGAAAATTGTCACCATGGCATAGAATGAAGTGGACTGACACCATGGTAAGGCTCTTAATAATGGCTGTTTATTACATTGGAGATGAGGCTGGTTCAGAAGGCTCTGATCCCACTAAGAAGAAAGCCACGGGGTTGCTGCAAAAGAAAGGGAAATGGAAATCAGTGTCAAGGGGCATGATGGAAAAGGGGTACTATGTGTCTCCCCAACAGTGTGAAGACAAGTTCAATGACTTGAACAAGAGGTACAAGAGGGTCAACGACATTCTAGGCAAGGGCACAGCTTGTCGGGTGGTGGAGAACCAAAGCTTGTTGGACACCATGGATATGCCTCAAAAGATGAAGGAGGAAGTTCGAAAACTGCTCAACTCCAAGCACTTGTTCTTCAGAGAAATGTGTGCTTACCACAACAGTTGTGGGCACAACAACAACTGTGGCACTTCCAACGGGCAACAATCAACTGAGGCTCAACCACAACATCAACAACAGCAGCAGTGTTTGCATTCATCAGAGAACGGGGTGGGGAGTTTGACAATGTTGAAAGAGGATGAGGATGAGGATATTGAGGACGAGGATTCGGAGGATTTTTCTGATGAGGAGGAAGAGGAATCTGGAGAAGGAGCATCAAGGGGTATGGAGGAGGATGAGAATGACGCAATGAGGAAGAGAGCAAGGAAAGGAGCGTTTGGTGTGTTGTCATCATCACCATCATCATATCAGGTGATGATGCAGCAATTGAATGTCGAAGTGAGTGGTGTGCTGCAAGATTTTGGGAAGAGTGCATGGGAGAAAAAGCAGTGGATGAAGAAGAGGGCAGTGCAGTTGGAGGAGCAGCAGGTGAGTTATCAAATGCAGGCATTTGAGTTGGAAAAGCAACGGTTGAAGTGGGCAAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAGAGATAAGCTTCAAAATGAACGGAGGAGGCTGGAAATAGAGAGAATGGTCTTGCTACTACGCCAGAAGGAGCTTGAATTGATTACTATTCAGAAGCAGCAGCAACAGCAACATTCTTCTACATAG 1329 0.4628 MEPNALGCGIFPNIGSGLLGVENLQNQQNPPHPLHHPQMVSYASQHDTDTHQQHPPQSIKHGYNYSATKTNKLQITLSDEDEPGFTAEDSGDPKRKLSPWHRMKWTDTMVRLLIMAVYYIGDEAGSEGSDPTKKKATGLLQKKGKWKSVSRGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLDTMDMPQKMKEEVRKLLNSKHLFFREMCAYHNSCGHNNNCGTSNGQQSTEAQPQHQQQQQCLHSSENGVGSLTMLKEDEDEDIEDEDSEDFSDEEEEESGEGASRGMEEDENDAMRKRARKGAFGVLSSSPSSYQVMMQQLNVEVSGVLQDFGKSAWEKKQWMKKRAVQLEEQQVSYQMQAFELEKQRLKWARFSSKKEREMERDKLQNERRRLEIERMVLLLRQKELELITIQKQQQQQHSST 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02799 442 MobiDBLite consensus disorder prediction 273 313 - -
Spst1g02799 442 Coils Coil 365 385 - -
Spst1g02799 442 PANTHER F16F4.11 PROTEIN-RELATED 8 433 - -
Spst1g02799 442 MobiDBLite consensus disorder prediction 77 96 - -
Spst1g02799 442 MobiDBLite consensus disorder prediction 275 302 - -
Spst1g02799 442 MobiDBLite consensus disorder prediction 43 63 - -
Spst1g02799 442 Coils Coil 395 422 - -
Spst1g02799 442 Pfam Myb/SANT-like DNA-binding domain 102 227 IPR044822 -
Spst1g02799 442 MobiDBLite consensus disorder prediction 241 261 - -
Spst1g02799 442 Gene3D - 105 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02799 Spst-Chr1 36563413 36564741 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst1g02799 Myb_DNA-bind_4 6.5e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02799 - - gmx:100808934 649.432