Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02779 CCTGAGTGGATGGCTCCAGAAGTTCTTCGCGATGAGCCATCCAATGAGAAATCAGATGTTTACAGCTTTGGTGTCATCTTGTGGGAGCTTGCAACATTGCAACAGCCTTGGAGTAATTTGAATCCACCACAGTCTTTAAGATCTGATGAATTCAATGAGCCCTGGAAACGCCCTTCTTTTTCAAGTATTATGGATTCTTTGAAAGTATTGCTCAAACCCCCTATACCTCAACCTGGTCGTCCAAACATTCCCAGTGAAGGGAATATTATCAATTTTCAAGTGGGGAGTGGGGACATTATCTTCCGGATATATTTGTAA 318 0.4245 PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWSNLNPPQSLRSDEFNEPWKRPSFSSIMDSLKVLLKPPIPQPGRPNIPSEGNIINFQVGSGDIIFRIYL 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02779 105 Pfam Protein tyrosine and serine/threonine kinase 2 47 IPR001245 GO:0004672|GO:0006468
Spst1g02779 105 SUPERFAMILY Protein kinase-like (PK-like) 1 81 IPR011009 -
Spst1g02779 105 Gene3D Transferase(Phosphotransferase) domain 1 1 78 - -
Spst1g02779 105 PANTHER SERINE-THREONINE PROTEIN KINASE 1 68 - -
Spst1g02779 105 ProSiteProfiles Protein kinase domain profile. 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02779 Spst-Chr1 36264275 36265334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02779 1 83 MAP Kinase Kinase Kinase AT5G03730 57.009 1.80e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Spst1g02779 PK_Tyr_Ser-Thr 1.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02779 K14510 - vum:124829281 140.198