Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02766 ATGGCTCAGAAGTACTTGTTGCACGAGCTACTTGAGGAGGATCAAGAGCCTTTTCTTCTAAACAAGTACATTTCCGATAGGCGAAGCCAGATGAAACGGCCTTCCCCGAACACCACTTTGCAAGTGAAGAAACGCAAATCAACCAATCCAAACGCAAACTTCCCGGGGAATTTCTGCAAAAGTGCTTGTCTTTTTTCCCTTACGGACACCCCGGATTTCAGAAAATCTCCACTCTTTGAATTCACTTCCGCAGCCAAAAGCCCTTGCAAGTCTCCCAACGCTATTTTCCTTCACATCCCTTCCCGAACCGCGACTTTGCTTCTAGAAGCCGCTGTCAGGATCCAGAAACACTCCTCACCCACTTCACGGCCTAAACCGAAAGCTCAACCCTTCGGCCTCTTGGGTTCCCTCTACAAGAGGCTCACGCAACGGAGCCAGAAAAAGCGCGAGATAGAGGGTGGTGGAAGCGTCAAGGTCTCTGTGAAGGATATTCTGAAGTGGGATTCATCTGTTGGGCGTAAAAAAGGTTCCAACAAGAAAGAAGAGGAAAAAACTGTGAATGTGAATGTGAATGCGTGTGAAGTGGGGTTCGCGTGTTCTTACAATGGTAGACCTAGTAGTGCTGTTTGGTCAGAGACCAACGAAGATAAATCTCTCGACATGGAAACGTCAAGTAGCGGCTACTCCGAAGAGATTCACTTCATGACCAATCACAAACAATCCACGTGCTTCTGCGAAAGCCCGTTCCGTTTTGTTCTTCAAAGCAGTTCTCCCTACTCCGGCCACCACACGCCGGAGCTTCTCTCGCCGAGTCGCCACGTAACTGAGGAGAAAGAAAGTAACGAAGGTGAGAGTGTGAACAAATTCGAACCAGGGGAAGAAGAGGAGGAAGATAAGGAACAGTGCAGTCCAGTGTGTGTGTTAGACCCACCGTTCGAGGACGATGAGGAAGGGCATGAGAACGGTGATGAAGGAGAGGAGGGTGGTTTTGATTTGGAGTGCAGCTATGCGATTGTACAGAGAGCCAAGCAGCAGTTATTGTACAAGCTTCGTAGATTTGAGAAACTGGCAGAGTTGGATCCCGTAGAACTTGAGAGAAGAATGCATGATGAAGAAGAGGACGAGGATGAAACATTTATGGAAGAGGAGGGTCGTGAAAATGAGGATAAGGAAGCATCATGTAAAGAAAATGACTTTAGAGAATTAATGTTGCAAGCTCTGTGCCAGTCAAGGGTCCATGACAGACATCAAATCCCGGAGGATTTTCAGAAGCTGGTATCTGATCTCATAATGGAAGAAGAGAGAGAACTTGATTACTTGGAAGATAGGGACATGGTGATAAGAAGGATATGCAAGAGGTTGGAATTGTGGAAAGAAGTGGAGTCCAACACAATTGATATGATGATAGAAGATGACTTCTCTAAGGAGGATGGTGGGTGGAAGAAAAATGTAGAGCAGATAAGAAATATGGCTGGGGAGCTTGAGCGTGCCATCTTTGGCTTTCTGGTGGAGGAATTTTCAGAGGAACTAGTATGTTAA 1539 0.4659 MAQKYLLHELLEEDQEPFLLNKYISDRRSQMKRPSPNTTLQVKKRKSTNPNANFPGNFCKSACLFSLTDTPDFRKSPLFEFTSAAKSPCKSPNAIFLHIPSRTATLLLEAAVRIQKHSSPTSRPKPKAQPFGLLGSLYKRLTQRSQKKREIEGGGSVKVSVKDILKWDSSVGRKKGSNKKEEEKTVNVNVNACEVGFACSYNGRPSSAVWSETNEDKSLDMETSSSGYSEEIHFMTNHKQSTCFCESPFRFVLQSSSPYSGHHTPELLSPSRHVTEEKESNEGESVNKFEPGEEEEEDKEQCSPVCVLDPPFEDDEEGHENGDEGEEGGFDLECSYAIVQRAKQQLLYKLRRFEKLAELDPVELERRMHDEEEDEDETFMEEEGRENEDKEASCKENDFRELMLQALCQSRVHDRHQIPEDFQKLVSDLIMEEERELDYLEDRDMVIRRICKRLELWKEVESNTIDMMIEDDFSKEDGGWKKNVEQIRNMAGELERAIFGFLVEEFSEELVC 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02766 512 MobiDBLite consensus disorder prediction 260 328 - -
Spst1g02766 512 MobiDBLite consensus disorder prediction 310 328 - -
Spst1g02766 512 MobiDBLite consensus disorder prediction 367 393 - -
Spst1g02766 512 MobiDBLite consensus disorder prediction 369 384 - -
Spst1g02766 512 MobiDBLite consensus disorder prediction 30 51 - -
Spst1g02766 512 MobiDBLite consensus disorder prediction 27 51 - -
Spst1g02766 512 MobiDBLite consensus disorder prediction 269 288 - -
Spst1g02766 512 PANTHER OS04G0572500 PROTEIN 1 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02766 Spst-Chr1 36138970 36142199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02766 1 313 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 45.238 2.24e-61 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02766 - - gmx:100790018 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02766 1 36138970 36142199 Spst1g02766 1 36138970 36142199 ECH
Spst1g02766 1 36138970 36142199 Spst7g00919 7 14599792 14603340 PCT