Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g02756 | ATGGATGTTTCTGAAACAAACTTACATGTATCGTGCAGGTTTTATGTTGCTGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCGGAAAACATTCTTGTTCGGGAAGATGGCCACATTATGCTCACAGATTTTGATCTGTCCCTGAGGTGTGCTGTTAACCCAACACTGTTGAAATCCTCTTCTGATGTGGACCCTGCAAAAATTTCTGGTTTAAGTGTGCAATCAAGTTGCATTGAACCATTCTGCATTGAGCCATCTTGTCAAGTTCCATGCTTCAGCCCAAGATTCCTACCTGCCGCTGCGAAAACAAGGAAATTGAAGGTTGATCCTTCTGCCCATGTCAGATCATTGCCACAGCTGGTGGCCGAGCCCACTGATGCAAGATCAAATTCATTTGTTGGTACACATGAATACTTGGCTCCCGAGATCATCAAAGAAGAGGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTCTATGAACTTTTGTATGGTAGAACTCCCTTTAAAGGTTCTAACAATGAAGAAACATTGGCCAACGTAGTGTTGCAGAGTCTTAGATTCCCTGACCACCCATTTGTTAGTTTCCAAGCAAAGGATCTGATTAGAGGGTTGTTGGTTAAGGACCCTGAAAACCGTTTGGGTTCAGAGAAAGGGGCAGCTGAGATTAAACAGCATCCCTTCTTTGAGGGCCTTAACTGGGCCTTAATTCGTTGCGCTGTCCCTCCGGAACTTCCAGACTATTATGATTTTGGAGTTTCAGACATGATGAACTCACAGGTCAAGGGTGCTAAGTACTTAGAGTGTAAAGTAGGAGAGCGTGTAGAATTCGAGTTGTTTTAA | 882 | 0.4376 | MDVSETNLHVSCRFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVNPTLLKSSSDVDPAKISGLSVQSSCIEPFCIEPSCQVPCFSPRFLPAAAKTRKLKVDPSAHVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLRFPDHPFVSFQAKDLIRGLLVKDPENRLGSEKGAAEIKQHPFFEGLNWALIRCAVPPELPDYYDFGVSDMMNSQVKGAKYLECKVGERVEFELF | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g02756 | 293 | SUPERFAMILY | Protein kinase-like (PK-like) | 12 | 265 | IPR011009 | - | |
Spst1g02756 | 293 | SMART | serkin_6 | 1 | 242 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g02756 | 293 | Gene3D | Transferase(Phosphotransferase) domain 1 | 11 | 58 | - | - | |
Spst1g02756 | 293 | PANTHER | FLIPPASE KINASE 1-RELATED | 11 | 264 | - | - | |
Spst1g02756 | 293 | Pfam | Protein kinase domain | 139 | 242 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g02756 | 293 | Pfam | Protein kinase domain | 11 | 60 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g02756 | 293 | FunFam | Serine/threonine-protein kinase OXI1 | 4 | 62 | - | - | |
Spst1g02756 | 293 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 31 | 43 | IPR008271 | GO:0004672|GO:0006468 | |
Spst1g02756 | 293 | FunFam | serine/threonine-protein kinase D6PK-like | 137 | 260 | - | - | |
Spst1g02756 | 293 | Gene3D | Transferase(Phosphotransferase) domain 1 | 135 | 256 | - | - | |
Spst1g02756 | 293 | ProSiteProfiles | Protein kinase domain profile. | 1 | 242 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g02756 | Spst-Chr1 | 35988297 | 35989178 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g02756 | 11 | 293 | AGC Kinase Gene Family | AT2G36350 | 73.196 | 1.38e-150 | 444 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_RSK-2 | Spst1g02756 | Pkinase | 1e-22 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g02756 | - | K08286 | gmx:100792120 | 541.191 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst7g00911 | 7 | 13943118 | 13947684 | Spst1g02756 | 1 | 35988297 | 35989178 | ECH | |
Spst1g02756 | 1 | 35988297 | 35989178 | Spst1g02756 | 1 | 35988297 | 35989178 | ECH | |
Spst1g02756 | 1 | 35988297 | 35989178 | Spst7g00911 | 7 | 13943118 | 13947684 | PCT |