Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02756 ATGGATGTTTCTGAAACAAACTTACATGTATCGTGCAGGTTTTATGTTGCTGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCGGAAAACATTCTTGTTCGGGAAGATGGCCACATTATGCTCACAGATTTTGATCTGTCCCTGAGGTGTGCTGTTAACCCAACACTGTTGAAATCCTCTTCTGATGTGGACCCTGCAAAAATTTCTGGTTTAAGTGTGCAATCAAGTTGCATTGAACCATTCTGCATTGAGCCATCTTGTCAAGTTCCATGCTTCAGCCCAAGATTCCTACCTGCCGCTGCGAAAACAAGGAAATTGAAGGTTGATCCTTCTGCCCATGTCAGATCATTGCCACAGCTGGTGGCCGAGCCCACTGATGCAAGATCAAATTCATTTGTTGGTACACATGAATACTTGGCTCCCGAGATCATCAAAGAAGAGGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTCTATGAACTTTTGTATGGTAGAACTCCCTTTAAAGGTTCTAACAATGAAGAAACATTGGCCAACGTAGTGTTGCAGAGTCTTAGATTCCCTGACCACCCATTTGTTAGTTTCCAAGCAAAGGATCTGATTAGAGGGTTGTTGGTTAAGGACCCTGAAAACCGTTTGGGTTCAGAGAAAGGGGCAGCTGAGATTAAACAGCATCCCTTCTTTGAGGGCCTTAACTGGGCCTTAATTCGTTGCGCTGTCCCTCCGGAACTTCCAGACTATTATGATTTTGGAGTTTCAGACATGATGAACTCACAGGTCAAGGGTGCTAAGTACTTAGAGTGTAAAGTAGGAGAGCGTGTAGAATTCGAGTTGTTTTAA 882 0.4376 MDVSETNLHVSCRFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVNPTLLKSSSDVDPAKISGLSVQSSCIEPFCIEPSCQVPCFSPRFLPAAAKTRKLKVDPSAHVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLRFPDHPFVSFQAKDLIRGLLVKDPENRLGSEKGAAEIKQHPFFEGLNWALIRCAVPPELPDYYDFGVSDMMNSQVKGAKYLECKVGERVEFELF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02756 293 SUPERFAMILY Protein kinase-like (PK-like) 12 265 IPR011009 -
Spst1g02756 293 SMART serkin_6 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02756 293 Gene3D Transferase(Phosphotransferase) domain 1 11 58 - -
Spst1g02756 293 PANTHER FLIPPASE KINASE 1-RELATED 11 264 - -
Spst1g02756 293 Pfam Protein kinase domain 139 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02756 293 Pfam Protein kinase domain 11 60 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02756 293 FunFam Serine/threonine-protein kinase OXI1 4 62 - -
Spst1g02756 293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 31 43 IPR008271 GO:0004672|GO:0006468
Spst1g02756 293 FunFam serine/threonine-protein kinase D6PK-like 137 260 - -
Spst1g02756 293 Gene3D Transferase(Phosphotransferase) domain 1 135 256 - -
Spst1g02756 293 ProSiteProfiles Protein kinase domain profile. 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02756 Spst-Chr1 35988297 35989178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02756 11 293 AGC Kinase Gene Family AT2G36350 73.196 1.38e-150 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst1g02756 Pkinase 1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02756 - K08286 gmx:100792120 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00911 7 13943118 13947684 Spst1g02756 1 35988297 35989178 ECH
Spst1g02756 1 35988297 35989178 Spst1g02756 1 35988297 35989178 ECH
Spst1g02756 1 35988297 35989178 Spst7g00911 7 13943118 13947684 PCT