Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02754 ATGGGTTCGTTCTCTGGCACTTGTGAGATAGTAGAAGCAAGGGAGGAGCTAAATACAAGGAAAACTCCTGGGTTTTATCAGTACAATTCTGAGTGTAGCACGTCCGAGAAAAGTCACAAACTTGCGATGCTGAAACTGGGATACAAGGATGATCTAGACGGCGATATTAATAAGTTGTTTGAATCGATTACTCTTAAGTCTTCATCAAAAGATTTGGGTCTTTTACAAGATGGTATAAGTCCGAGGCTGAAAAGTGCGTTAAAAAAGCCAATTACAATGGGTGTTCCTCGGTCCCCAAGAGTTGGCGCTTCTGAGCCTGTTAATTTAAAGCAAGCATTAAGAGACCTTTGCATATCTAAGGCATCGGAAATGGCTGCTATGAAGCGGTTATCAAAATCAACAGCTTCTCCAAGAATATCTGAAGTTGGGAAGATACAGACATTGTACAATTCAGTTGTAGCTGAAACCAGTCGATCTGGGTCTTACTCTGCTGAAAGCAAGGGGCCGCAAATTGAAATAGCTCTTGTACCTGAAAAAAGTGAGTCCCTTTCATTGGTGAAAACCTCTCAATCTTATCAAACTTCCCAAATCGCATCCTCGAGCCGAAACATTCATTCGTCTCGGGAAATTGCTCTTGCTACTACTCAATATGATTCTGGGACTTCATCGATACAGAATGATCTGGCATGCCAATCAGGTAAAGTTGGAATTCAATCACAACGTGTGGTACCTGTTGAAACAGAAGAACAAGCATCTGCCTCTTCTCCTTCTCTTCATAATACAATTGGAAGCAAACCAGAGGTGCCCAAAAATGCTTCTTCCCCTAAAAAGTTGGGTAATAAAGCATTTGTATCAAATACCGGGAAGAAAGGTAGGTTGCAAACAGTATCTTCATCTGCTTCTGTAAATGGCAACAGAGTTAACAAACTTCCACGCCATGCCCCCCGCACTGTTAAATCGGTCATCAAGAACAAGAGTATGACTAAGAAGAAACTAAAGGAGGATCCAGGTTCTGCTTTAAGTGGTCCTATGCCCAATGAAGTTAAGAAGCCAGTTCCTGGTACGCCTCGGCTAATTTGTGAGAGATGTAGGTGTGCTTTAGGAAATACAAGTGAAGAGAGAAACCAAGATACTGTGGCATTGGACTTTACCAGTCCTGGAAATGGAGCAAACTTGAGTAATGTGCACTCAGGTTCAAACAAATCTGGTTTGATGTCAACTGGCTGTAATAAAAGCAAAATAGGTGCAAAAATCAAGAACTCCAAGTTGAAAGAGCAACTTGAATTTTCACAAAGTTCTAAGAGTAGTCAAGGTGAGTACAGTAGTAGTACAAGTACCAGTGATGAGAGCAATGTAAGTGGCTCAAGTCGTAGCACTAGGCCTCACATGTCAAAAGATGTCAGATGGGAAGCCATAAGACATGCTCAAATGCAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTCTTAAAGAAACTTGGCTGTGGAGACATTGGGACTGTATATCTTGCGGAACTAATTGGTACAAGTTGCTTGTTTGCTATTAAGGTCATGGACAATGAATTTTTGGAAAGGAGAAAGAAAATGCCTAGGGCTCAAACTGAGAGAGAAATATTAAGGATCCTGGATCATCCTTTTCTTCCCACAATGTATGCACAATTTACATCAGATAATCTATCGTGTCTCGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGATGTTTCTCGGAGCCAGCAGCAAGGTAA 1773 0.4174 MGSFSGTCEIVEAREELNTRKTPGFYQYNSECSTSEKSHKLAMLKLGYKDDLDGDINKLFESITLKSSSKDLGLLQDGISPRLKSALKKPITMGVPRSPRVGASEPVNLKQALRDLCISKASEMAAMKRLSKSTASPRISEVGKIQTLYNSVVAETSRSGSYSAESKGPQIEIALVPEKSESLSLVKTSQSYQTSQIASSSRNIHSSREIALATTQYDSGTSSIQNDLACQSGKVGIQSQRVVPVETEEQASASSPSLHNTIGSKPEVPKNASSPKKLGNKAFVSNTGKKGRLQTVSSSASVNGNRVNKLPRHAPRTVKSVIKNKSMTKKKLKEDPGSALSGPMPNEVKKPVPGTPRLICERCRCALGNTSEERNQDTVALDFTSPGNGANLSNVHSGSNKSGLMSTGCNKSKIGAKIKNSKLKEQLEFSQSSKSSQGEYSSSTSTSDESNVSGSSRSTRPHMSKDVRWEAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDNEFLERRKKMPRAQTEREILRILDHPFLPTMYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAAR 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02754 590 MobiDBLite consensus disorder prediction 312 326 - -
Spst1g02754 590 Pfam Protein kinase domain 488 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02754 590 PANTHER FLIPPASE KINASE 1-RELATED 221 590 - -
Spst1g02754 590 ProSiteProfiles Protein kinase domain profile. 487 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02754 590 MobiDBLite consensus disorder prediction 425 460 - -
Spst1g02754 590 MobiDBLite consensus disorder prediction 425 464 - -
Spst1g02754 590 MobiDBLite consensus disorder prediction 244 353 - -
Spst1g02754 590 MobiDBLite consensus disorder prediction 374 409 - -
Spst1g02754 590 FunFam Serine/threonine-protein kinase D6PK-like 485 570 - -
Spst1g02754 590 Gene3D Phosphorylase Kinase; domain 1 481 588 - -
Spst1g02754 590 SUPERFAMILY Protein kinase-like (PK-like) 460 588 IPR011009 -
Spst1g02754 590 MobiDBLite consensus disorder prediction 244 268 - -
Spst1g02754 590 MobiDBLite consensus disorder prediction 287 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02754 Spst-Chr1 35982531 35984303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02754 1 590 AGC Kinase Gene Family AT3G52890 43.140 4.06e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst1g02754 Pkinase 2.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02754 - - gmx:100792120 957.592