Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02750 ATGCTTGTGATTGCAATGGATGCGGACAAACGCGCATCCACTTCCATTTCTTTTTCTCCTTCCTCTTCCGACTCTTCTTCATGCGAACATTTGGATCGGCTTGTCGACACGGAAGAGATGGAAGCGGCGGAGACTCTTGCACAGTTGGCAATGTGCGACTCTCACTCCACTGATAAATGCACCAAACCAGGTGCGACTCCAGTCTCGCATCTCTCACCGACTCTTCACTCCGATCCCTCTCTTGGGCCCGAGGTTGCAGATCAGCAGCTAGATGAAAAAATACCCAATACTGCATCTGTAGAAACAGAGAAGACTGAGCAGGATAACTGTTCGAGACACATTGAGGTGGAGCAGGATGCTGATTTATTACCTATTTCAGTGGAGCAGGATGCTGATTTGTTATCTAACTCAAGTAACATTTTAGGTCGATGTAACAAGTCAAGGAGAAATTTAACTGCGGAAGAAAAAGAAGCTAGGAGGGTACGCAGGATATTGGCAAATAGAGAGTCAGCTAGGCAGACAATTCGTCGTAGGCAGGCTCTGTGTGACGAGTTAACAAAAAAAGCTGCCACTTTGGTGGAGGAGAATGAAAGTTTAAAAAAGGAGAAAGATTTGGCTTTGAAAGAGTATGAGTCTTTGGAGACTACAAATAAGTACTTAAAGGCACAAATAACCAAGTCAATGAACACTGAAGTGGAGAAAACTCCTGTTGAGCCTGGGTCATCTGTGGCTGAGTTTGGAAATGGACAATCATCACCTTCCAGTAGCCTGAAAGATAAACAAGATAATAAACCATGTAGTTCTAGCTCATCTTTGAATACACTGGCAAATGTGGATTATCAAGCCTGGACAGAGGCCAGACTCATTAATGATCCTCCAAGGTTTTCTTTGGATGGAGGTGAGAAGAAAACAGGATGTCACATTTTAGAAAAGTATCATGGACCCACACGTTGCTGTAATGGTCATGCTTCTGCTTTCAAACAAGAAAACGAACTTAGATTACATTCTGCTCCAAACAATAAAGTATCTTCAACAGCTTATATTGCAACAACTTCACTGGAAAAGAAACAAGAACAATTCATTTGTCAGGGAAAAAGTTTAGCGGATGCAATTGCTGCTGCAGAAGCAAGAAAGAGGCGAAAGGAGTTAACAAAGCAGAAAAGCATCCATAACCGCCAGTCCCGGATGCAGTGTTGA 1197 0.4311 MLVIAMDADKRASTSISFSPSSSDSSSCEHLDRLVDTEEMEAAETLAQLAMCDSHSTDKCTKPGATPVSHLSPTLHSDPSLGPEVADQQLDEKIPNTASVETEKTEQDNCSRHIEVEQDADLLPISVEQDADLLSNSSNILGRCNKSRRNLTAEEKEARRVRRILANRESARQTIRRRQALCDELTKKAATLVEENESLKKEKDLALKEYESLETTNKYLKAQITKSMNTEVEKTPVEPGSSVAEFGNGQSSPSSSLKDKQDNKPCSSSSSLNTLANVDYQAWTEARLINDPPRFSLDGGEKKTGCHILEKYHGPTRCCNGHASAFKQENELRLHSAPNNKVSSTAYIATTSLEKKQEQFICQGKSLADAIAAAEARKRRKELTKQKSIHNRQSRMQC 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02750 398 Pfam bZIP transcription factor 155 217 IPR004827 GO:0003700|GO:0006355
Spst1g02750 398 CDD bZIP_plant_GBF1 160 210 IPR045314 GO:0003700|GO:0006355
Spst1g02750 398 MobiDBLite consensus disorder prediction 56 76 - -
Spst1g02750 398 Coils Coil 182 216 - -
Spst1g02750 398 SMART brlzneu 155 219 IPR004827 GO:0003700|GO:0006355
Spst1g02750 398 MobiDBLite consensus disorder prediction 244 270 - -
Spst1g02750 398 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 157 220 IPR004827 GO:0003700|GO:0006355
Spst1g02750 398 SUPERFAMILY Leucine zipper domain 159 214 IPR046347 GO:0003700|GO:0006355
Spst1g02750 398 Coils Coil 373 393 - -
Spst1g02750 398 MobiDBLite consensus disorder prediction 56 83 - -
Spst1g02750 398 Gene3D - 158 210 - -
Spst1g02750 398 MobiDBLite consensus disorder prediction 6 29 - -
Spst1g02750 398 MobiDBLite consensus disorder prediction 230 270 - -
Spst1g02750 398 PANTHER G-BOX-BINDING FACTOR 3-RELATED 128 267 IPR044827 GO:0003700|GO:0006355|GO:0043565
Spst1g02750 398 MobiDBLite consensus disorder prediction 12 28 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02750 144 246 bZIP Transcription Factor Family AT1G19490 59.223 2.46e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst1g02750 bZIP_1 2.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02750 - - gmx:100788624 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02750 1 35951434 35956120 Spst1g02750 1 35951434 35956120 ECH