Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02749 ATGAGTCCGGCGGACGACGCGGGTCACGGCACTCACACGTCGTCGACGGCGGCGGGCGTAGTGGTGAAGGGGGCGAGTGTGTCCGGCATTGGCAAAGGCACGGCGAGGGGTGGCGTCCCATCAGCCCGCGTGGCCATGTACAAGGTATGCTGGGCCGTCGGCTGCAGCGACATGGACATGCTAGCCGGCTTCGATCAGGCCATCGCCGACGGTGTCAACTTCCTCTCCGTGTCCATCGGTGGCCCCGCACGTGATTTCTTCACCGACCCAATTGCCATCGGAGCATTCCATGCTATGGCCAGAGGGGTTCTCACTTCTTGCTCCGCTGGCAACGGTGGCCCCCGCCCCATGTCCGTGGAGAACGTCGCCCCCTGGATTTTGACTGTGGCTGCTACCACCATTGATAGACAGTTCATTACAGTTGCTGCGTTCGGTGATGGATCGAACGCAACAGGAATGTCTATTAATACCTTTAACCCCAAAAAGAAGATGTATCCATTGACTAGTGGACGCCTTGCGGCGAGCTTTCCCGGAGATGAAGATATCTTTGGCAGTGCCCGAGGTCCTCAAACAGTCACCCCAAATATCCTCAAGCCTGACTTGACTGCCCCGGGAGTGGACATACTAGCTGGTTATTCCAAACGGGCATCACTAACAGGGTACCATATAGACAATCGTTACGATGTATTTAACATATTATCAGGAACATCAATGTCATGCCCACATGCCACCGCAACAGCTGCCTATGTCAAATCCTTCCACCCTGACTGGAGTCCTGCTGCAATTAAATCTGCTCTCATGACCACTGCCACTCCCATCAAAATCAGTGACAACTTCACACTACTGGGATCTGGGTCAGGACAGATAGATCCTGTAAAGGCAGTACATCCTGGTCTGGTTTACGACATTGGAGTGCACTCCTATATCTCCTTCCTTTGCAAGCAAGGCTTCAACAACACCAACATTGGCAAACTAATTGGCATAAAAAATTTCAATTGTGCAAGAATTAAGACAGAGCCAGGAGCTGATGGAATCAACTATCCCAGCATGCATATCCAACTCTTAAATGCCAGAGATAGAATTTCTGCAGTTTTCTATCGGACTGTGACTAATGTAGGATTTGGAAATTCAACTTACAAGGCTATAGTTACTGCCCCTAAAGGTCTTTCTGTGAAGGTCATCCCAGATACATTGTATTTTAGTATATTGCACCAAAAACTGTCATTTAAGGTTGTGGTGAAGGGGCCTCCAATGTCCGAGGATGCATTTGTAGAATTTGCATCACTTGAATGGAATGACTCTAAACACACTACTGTCAGAAGTTCTATTCTGGCAATAATGTGCCAAAGTATAGAAGCTATTGCATTCATAGTCAGTCATTCACCACATCATAGAGACCAGCCAAAATGTAATTGGATGCACACGAACAAGGAAAAGGAGACCAGTGTGCAGCCATTAAAACATTAG 1467 0.4888 MSPADDAGHGTHTSSTAAGVVVKGASVSGIGKGTARGGVPSARVAMYKVCWAVGCSDMDMLAGFDQAIADGVNFLSVSIGGPARDFFTDPIAIGAFHAMARGVLTSCSAGNGGPRPMSVENVAPWILTVAATTIDRQFITVAAFGDGSNATGMSINTFNPKKKMYPLTSGRLAASFPGDEDIFGSARGPQTVTPNILKPDLTAPGVDILAGYSKRASLTGYHIDNRYDVFNILSGTSMSCPHATATAAYVKSFHPDWSPAAIKSALMTTATPIKISDNFTLLGSGSGQIDPVKAVHPGLVYDIGVHSYISFLCKQGFNNTNIGKLIGIKNFNCARIKTEPGADGINYPSMHIQLLNARDRISAVFYRTVTNVGFGNSTYKAIVTAPKGLSVKVIPDTLYFSILHQKLSFKVVVKGPPMSEDAFVEFASLEWNDSKHTTVRSSILAIMCQSIEAIAFIVSHSPHHRDQPKCNWMHTNKEKETSVQPLKH 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02749 488 Gene3D - 312 447 - -
Spst1g02749 488 SUPERFAMILY Subtilisin-like 2 295 IPR036852 GO:0004252|GO:0006508
Spst1g02749 488 CDD Peptidases_S8_3 1 271 IPR034197 -
Spst1g02749 488 Pfam Fibronectin type-III domain 345 444 IPR041469 -
Spst1g02749 488 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 185 443 IPR045051 -
Spst1g02749 488 Gene3D Peptidase S8/S53 domain 2 134 IPR036852 GO:0004252|GO:0006508
Spst1g02749 488 Gene3D Peptidase S8/S53 domain 185 308 IPR036852 GO:0004252|GO:0006508
Spst1g02749 488 ProSitePatterns Serine proteases, subtilase family, serine active site. 235 245 IPR023828 -
Spst1g02749 488 PRINTS Subtilisin serine protease family (S8) signature 5 18 IPR015500 -
Spst1g02749 488 PRINTS Subtilisin serine protease family (S8) signature 234 250 IPR015500 -
Spst1g02749 488 ProSiteProfiles Serine proteases, subtilase domain profile. 1 295 - -
Spst1g02749 488 Pfam Subtilase family 4 272 IPR000209 GO:0006508|GO:0008236
Spst1g02749 488 Gene3D - 135 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02749 Spst-Chr1 35947968 35951004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02749 5 444 Subtilisin-like Serine Gene Family AT5G58820 37.739 4.73e-93 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02749 - - sot:107059488 471.085