Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02747 ATGGAGCTTCAACCTTTTACACTGTGCTCTCTGATGCAGCTCTTCTCTGGCGTCTCCTTTGGCACACTGTGTCTCTCAGTGGCCATAATCACCTTCGTCACTCTCACTCTTTTGCCATCGTTCTCCTTTCGCTGGCCCAGAATAAACATGTTCTTCTGTAACTGCGAAACTTGCGAGGCCTATCTCACTTCAAGCTGGTCCAAAAGCTTTCACAACCTTTGCGATTGGTATGCTCATCTCCTCCGAAACTCGCCCACCAAAACCATCCACATCCACGTCCTCCGAAACACCATCACCGCCAACCCCGACAACGTCGAGTACGTCCTCAAGACCAGGTTCGACAATTTCCCTAAGGGGAAAACATTCTCCACCATCCTCGGCGATTTCCTCGGCCGAGGAATCTTCAACGTCGACGGAGAGTCCTGGAGCTTCCAGAAGAAGATGGCCAGTTTGGAACTCAGCAAGACCTCCATACAATCCTTCGCTTTCGAGGTTGTCAAATTCGAAATCCAACACCGACTCGTCCCTATCCTCGTTCTCTCGAAACAAAACGACGCTGTTTTGGATTTGCAGGATGTTTTCAAGAGATTCTCGTTCGACAGCATTTGTAAATTCTCCTTCGGGTTGGACCCTATGTGTCTGGAACTGTCTTTGCCTATGTCGGACTTCGCTGTTTCATTTGACATGGCGTCAAAGTTGTCCGCGGAGAGAGCCATGTCGGTGTCTCCTCTAATTTGGAAGATGAAAAGGTTCCTCAACGTAGGCACGGAGAAGAAGCTACAAGAAGCGGTTAGAATGATCAACATCTTAGCCAAAGAGGTCATAAGACAAAGAAGAAAAATGGGGTTTTCGTCTCACAAGGACTTGTTGTCACGGTTCATGAGTAGTGTCAACGATGACACATACTTGAAAGATATTATCGTGTGTTTCTTACTAGCTGGCCGTGACACAGTGGCTTCGGCTCTCACCAGCTTCTTCTGGCTATTGGCAAAACACCCCGAAGTGGAGTCCAAGATTGTTGCAGAAGCAGAGGAAGTAATTGGAGCAGACAAGAACAAAGATATTTCAAGCTTCGAGGAGCTTCAACAACTGCACTATTTACAAGCGGCGGCGTATGAGAGCATGAGACTGTACCCTCCAATTCAATTCGATTCAAAGTTTTGTTTGGAGGATGATGTGTTACCTGATGGGACTTTTGTGAAGAGAGGAACTAGGGTTACTTACCATCCTTACGCGATGGGTCGTTTGGAGGAAATATGGGGTTGGGATTGCTTAGAGTTTAGGCCAGAAAGGTGGTTGAAAAATGGGGTGTTTTGCCCTCAGAATCAATTCAAGTACCCGGTTTTTCAAGGGGGGATGAGGGTGTGTTTGGGCAAAGAAATGGCTTTGTTGGAACTCAAGAGTGTCGCCATTTCGTTGCTTCGGAGGTTCCACATCGAACTAGTGGCACCACATCATCGCATCCCGCGTTTCTCGCCTGGCCTCACTGCCACTTTTAGTTTCGGCCTTCGCGTAAAGGTTCGTGATCAAGGAACCCAACAACACCACCCTCTTCCTCTTCATCGTTCTTAA 1572 0.4777 MELQPFTLCSLMQLFSGVSFGTLCLSVAIITFVTLTLLPSFSFRWPRINMFFCNCETCEAYLTSSWSKSFHNLCDWYAHLLRNSPTKTIHIHVLRNTITANPDNVEYVLKTRFDNFPKGKTFSTILGDFLGRGIFNVDGESWSFQKKMASLELSKTSIQSFAFEVVKFEIQHRLVPILVLSKQNDAVLDLQDVFKRFSFDSICKFSFGLDPMCLELSLPMSDFAVSFDMASKLSAERAMSVSPLIWKMKRFLNVGTEKKLQEAVRMINILAKEVIRQRRKMGFSSHKDLLSRFMSSVNDDTYLKDIIVCFLLAGRDTVASALTSFFWLLAKHPEVESKIVAEAEEVIGADKNKDISSFEELQQLHYLQAAAYESMRLYPPIQFDSKFCLEDDVLPDGTFVKRGTRVTYHPYAMGRLEEIWGWDCLEFRPERWLKNGVFCPQNQFKYPVFQGGMRVCLGKEMALLELKSVAISLLRRFHIELVAPHHRIPRFSPGLTATFSFGLRVKVRDQGTQQHHPLPLHRS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02747 523 PANTHER CYTOCHROME P450 51 498 - -
Spst1g02747 523 CDD CYP86A 85 492 - -
Spst1g02747 523 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02747 523 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02747 523 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02747 523 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02747 523 SUPERFAMILY Cytochrome P450 71 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02747 523 Pfam Cytochrome P450 86 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02747 523 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02747 523 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02747 523 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02747 523 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02747 523 Gene3D Cytochrome P450 56 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02747 Spst-Chr1 35930763 35932334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02747 52 510 Cytochrome P450 AT2G27690 59.483 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02747 K20624 - gmx:102662117 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02747 1 35930763 35932334 Spst11g01216 11 36511152 36512627 ECH
Spst1g02747 1 35930763 35932334 Spst1g02747 1 35930763 35932334 ECH