Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02746 ATGAACTTCCATAACCAACTCTTTCCTCTTCTCACTCTTTTCTTCATTGTGTTTCTCTCAGGGGAAAGGGTGTTGCAAACAGAGGCTGGCCATCATCATCATCATCATCCTCATCATCATGGTCCAGCAAAGTTGTTCGTTTTCGGAGACTCGTATGCCGACACAGGTAACATTCAGAAAGCTGTTTCAAAATCATGGAAAGACCCTTATGGCATCACCTTTCCCGGGAAGCCCTCCGGCAGATTTTCCGACGGTAGAGTCCTCACCGATTACATTGCTAAGTATTTGAAAGTGAAATCACCAATTCCCTACAGATACAGAAAAGTGATACCAGAACATGTGAAATATGGGATGAACTTTGCGTTTGGTGGAACTGGTGTGTTTAACACGTTGGTTCCATTCCCAAACATGACAACCCAGATCGATTTCTTGCAGCAGCTCATCAAAGACAAAGTGTACTCTGCCTTGGATCTCACCAACTCAGTTGCCCTTCTTTCTGTCGCTGGAAATGACTACAGTCGTTTCATGCAAACAAATGGCTCTCAGGGTTTAGAATCTTTCGTGGTCTCAGTGGTTAACCAAACAACGATGAATCTGATTCGCATAAAAGAGTTGGGAGTGAAGAAAATAGTGGTGGGTGCTCTACAACCCCTTGGATGCCTTCCACAGATCACAGCCTCGACCTCATTCCAACGTTGCAATGAAACCTCCAACGCCTTCGTGCTTCTCCACAACACCCTCTTGAACCAAGCAGTGACCAAACTGAACCAACAAACAAGGGACCGTTCCACCTTCGTAATTCTTAACCTTTTTGACAGCTTCATGTCAGTGTTGAACCACCCTTCCACACACAACATTCGGAACAAGTTGTACCCATGTTGTGTTGGTGCGAGCAGTAACTACTCGTGTGGGAGTGTGGAGAACGATGTCAAGAAATATAGGGTTTGTGATGACCCCAAATCTGCTTTCTTTTGGGACCTTGTCCACCCTACACAAGCTGGATGGAATGCAGTGTACAACAAGTTGCGAACCATGAATGATCTTCAACAGATTCTTTACTAG 1062 0.4501 MNFHNQLFPLLTLFFIVFLSGERVLQTEAGHHHHHHPHHHGPAKLFVFGDSYADTGNIQKAVSKSWKDPYGITFPGKPSGRFSDGRVLTDYIAKYLKVKSPIPYRYRKVIPEHVKYGMNFAFGGTGVFNTLVPFPNMTTQIDFLQQLIKDKVYSALDLTNSVALLSVAGNDYSRFMQTNGSQGLESFVVSVVNQTTMNLIRIKELGVKKIVVGALQPLGCLPQITASTSFQRCNETSNAFVLLHNTLLNQAVTKLNQQTRDRSTFVILNLFDSFMSVLNHPSTHNIRNKLYPCCVGASSNYSCGSVENDVKKYRVCDDPKSAFFWDLVHPTQAGWNAVYNKLRTMNDLQQILY 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02746 353 Pfam GDSL-like Lipase/Acylhydrolase 45 341 IPR001087 GO:0016788
Spst1g02746 353 PANTHER OSJNBB0059K02.9 PROTEIN 18 352 - -
Spst1g02746 353 Gene3D SGNH hydrolase 30 350 IPR036514 -
Spst1g02746 353 SUPERFAMILY SGNH hydrolase 41 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02746 Spst-Chr1 35925998 35929276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02746 45 333 Acyl Lipid Metabolism Gene Families AT4G10950 28.889 2.35e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02746 - - gmx:100818373 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02746 1 35925998 35929276 Spst1g02746 1 35925998 35929276 ECH
Spst1g02746 1 35925998 35929276 Spst7g01106 7 30498830 30505292 PCT