Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02743 ATGGCGGAAGAACATGGATGCCAAGCTCCCGAAGGTCACAGACTCTGCGCCAACAACTGCGGCTTCTTCGGTAGCCCCGCCACCATGAATCTCTGCTCCAAATGCTACAGAGACATCCGATTGAAGGAAGAAGAACAAGCCAAAACCAAATCCACCATCGAAACCGTTCTCTCCTCGTCCTCCTCCTCTTCCGCAGCCGCCGCAACCGTCTCCACCGCTGTGGTTTCCTTGCCTGCGCCGGTTGAATCCCTCCCTCAACCGGCGGCGGTGACCGCGCCGGACGCGTGCGCTCCGTCTCAGGCGAACCGGTGCGGCGCGTGCCGGAAGCGCGTGGGGTTGACGGGGTTTAAGTGCCGGTGTGGAACCACGTTCTGTGGGACCCACAGGTACCCCGAGAAACACGCGTGTGGCTTCGATTTCAAGGCGGCGGGGAGAGAGGAGATAGCTCGGTCGAATCCTGTGATCAAAGGGGAGAAGCTACGGAGGATTTAA 492 0.5996 MAEEHGCQAPEGHRLCANNCGFFGSPATMNLCSKCYRDIRLKEEEQAKTKSTIETVLSSSSSSSAAAATVSTAVVSLPAPVESLPQPAAVTAPDACAPSQANRCGACRKRVGLTGFKCRCGTTFCGTHRYPEKHACGFDFKAAGREEIARSNPVIKGEKLRRI 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02743 163 Gene3D - 80 159 IPR035896 -
Spst1g02743 163 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Spst1g02743 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 58 - -
Spst1g02743 163 SUPERFAMILY AN1-like Zinc finger 96 158 IPR035896 -
Spst1g02743 163 Pfam AN1-like Zinc finger 104 140 IPR000058 GO:0008270
Spst1g02743 163 Gene3D - 1 71 - -
Spst1g02743 163 SMART AN1_Zf_4 104 141 IPR000058 GO:0008270
Spst1g02743 163 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Spst1g02743 163 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Spst1g02743 163 ProSiteProfiles Zinc finger AN1-type profile. 98 144 IPR000058 GO:0008270
Spst1g02743 163 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 163 - -
Spst1g02743 163 FunFam Zinc finger AN1-type containing 6 80 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02743 Spst-Chr1 35882180 35882671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02743 1 163 C2H2 Transcription Factor Family AT3G52800 53.529 5.58e-52 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02743 - - gmx:100527251 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02743 1 35882180 35882671 Spst1g02743 1 35882180 35882671 ECH