Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02738 ATGGGAAGTGGAGTGATCAGAAAATTATCTGAAGGATCAACCCGTGCTCATTCCTGGAACCAAAACAGAACCACTTCAATTCACTTCCCTTTAGGTCCCACTTTTTATTTTCTGTTTCTTGAATCAAATGAGCATCAGCATGTGCATTCTTCGAGTTCACTGCATTTGGCATATTCCTCTGCCATCTCCTTTGGATTTGTTGCATGGGGTTATCAGGCAATTCACCCTCCTCCTCCAAAGTTATGTGGCTCTCCCAGTGGTCCCCCTATAACAGCACCCAGAATCAAACTAAAAGATGGAAGGAATTTAGCATACAAAGAGCATGGTGATGTTGCTGAGGACTTAGGGGTCTACATTGTATCTTTTGATAGACCAGGGTATGGGGAAAGTGATTCTCATCCAAATCCGACAGTGAAGAGTCTGGCACTAGATATAGAAGAAGTTGCGGATAAATTGGGATTGGGGTCCAAATTCTACGTAATAGGTTTCTCCCTTGTGGGCCAGCTTGTTTGGAGGTGCCTTAAGTACATACCTCACAGGTATGAAGCATTCAGGTTGGCAGGTGCAGTGCTAATAGCCCCAGTTGTGAACTACTGGTGGGATGGTCTTCCTGAAAACTTAACAAGTGAAGTCTTCCACCAACAAAAACTACAAGACCAGTGGACACTCGTGTTTATAGATCCTCTTTTGGCTAAGAGGAAAGATCGAAAGAATCATGTGAGCCGTGGAGTAGACTTATCTGATACATGGGTCAGACCTTGCTTAACTATGTCCTGTCAAGAAGAAAAAGAAATGGTGGTTGAGGAGGGTGAGATGAACTCCCAAGGGGAGGCGGAATCTAGATTCCAACAAGATGCCAACAAGAACCACAATTCTCCATTCTCACCATCATCCATTGGAAGACAAACATCAATATACTCCCTCACACTGGACGAGTTCCAGCACAGTCTATGTGAGACTGGCAAGAACTTCGGCTCCATGAACATGGACGAGTTTATCAGCAGCATTTGGAACGCTGAAGAGAACCAAGCCATAATAACCTCCTCCAACGTCCCTATTTCCCAACCCTTCATAGACAGAGACACGATAACAACAACAATAAGGAAACAACCAAGCCTACCTCGGCAACCCTCACTGTCTCTCCCTGCCCCTCTCTGCAGGAAAACCGTGGACGAAGTTTGGTCCCAGATTCAGAAAGAACAACACAATAATAACAACAACAACAACAATGTTATGAACAATACCGAGTCTGCCCCTCGCCAACCCACTTTTGGTGAGATGACTTTGGAGGACTTTCTGGTCAAGGCTGGGGTGGTTCGGGAGCCACCATGTGCACCACCACCGTTGCCTCATCACTCTCACCACCTCCAGCAGCAGCCGCAGCATTACACGAACAACAACGGTGCAATGCCCGGAATGGGTTCTTCTTTTGTAGGTAGGAATGTTATTGGTGCAGTGAGTAACGTGGTTGCACCGGGTTACCACGTGGCGGAGGCTTCTGGTGGGTATGCTGGAAATGGTAAGAGGGATGGTGGTGGGGGGTTTCATCAGCAAGGAGTTTGCTTTGGAGGGAGTGGGTATGGGGTGGGTCCCACCATGGGAATGGGTGGGCCTGTGAGTCCAGCTAATTCTTCTGATGGGATAGGTAATGATTGTGGGCAGTTTGGGCTTGAGATGAGTGGTTTGAGAGGTAGAAAGAGGATGGGTGATGGCCCTGTGGAAAAGGTGGTGGAGAGGAGGCAGAGGAGGATGATCAAGAATAGAGAGTCAGCTGCCAGATCTAGAGCCAGGAAACAGAACCTTATACGGTTTTTGCCTTGGCAGGCATACACAGTTGAATTAGAAGCGGAACTAAACCAATTAAAAGAAGAGAACGCCCAACTGAGACAAGCGCTGGCCGAGATCGAGAGGAAAAGAAAGGAACAGAGTTCAAACCAACGCTCAGAAAGTGAAAGAGAAGCTGAGAGCTTTGAGAAGGAACATGAGTTCTCCTTGGTGAAGAAACTGCATATGGTGACCAGAGAAGTCCTTGAAATTTTGAACGCACCGGAGATTGTTGACTTGTATGACTAA 2073 0.4694 MGSGVIRKLSEGSTRAHSWNQNRTTSIHFPLGPTFYFLFLESNEHQHVHSSSSLHLAYSSAISFGFVAWGYQAIHPPPPKLCGSPSGPPITAPRIKLKDGRNLAYKEHGDVAEDLGVYIVSFDRPGYGESDSHPNPTVKSLALDIEEVADKLGLGSKFYVIGFSLVGQLVWRCLKYIPHRYEAFRLAGAVLIAPVVNYWWDGLPENLTSEVFHQQKLQDQWTLVFIDPLLAKRKDRKNHVSRGVDLSDTWVRPCLTMSCQEEKEMVVEEGEMNSQGEAESRFQQDANKNHNSPFSPSSIGRQTSIYSLTLDEFQHSLCETGKNFGSMNMDEFISSIWNAEENQAIITSSNVPISQPFIDRDTITTTIRKQPSLPRQPSLSLPAPLCRKTVDEVWSQIQKEQHNNNNNNNNVMNNTESAPRQPTFGEMTLEDFLVKAGVVREPPCAPPPLPHHSHHLQQQPQHYTNNNGAMPGMGSSFVGRNVIGAVSNVVAPGYHVAEASGGYAGNGKRDGGGGFHQQGVCFGGSGYGVGPTMGMGGPVSPANSSDGIGNDCGQFGLEMSGLRGRKRMGDGPVEKVVERRQRRMIKNRESAARSRARKQNLIRFLPWQAYTVELEAELNQLKEENAQLRQALAEIERKRKEQSSNQRSESEREAESFEKEHEFSLVKKLHMVTREVLEILNAPEIVDLYD 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02738 690 Coils Coil 611 660 - -
Spst1g02738 690 Gene3D - 577 643 - -
Spst1g02738 690 MobiDBLite consensus disorder prediction 637 657 - -
Spst1g02738 690 SMART brlzneu 575 648 IPR004827 GO:0003700|GO:0006355
Spst1g02738 690 CDD bZIP_plant_BZIP46 579 642 - -
Spst1g02738 690 MobiDBLite consensus disorder prediction 276 297 - -
Spst1g02738 690 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 582 597 IPR004827 GO:0003700|GO:0006355
Spst1g02738 690 SUPERFAMILY Leucine zipper domain 579 630 IPR046347 GO:0003700|GO:0006355
Spst1g02738 690 MobiDBLite consensus disorder prediction 401 420 - -
Spst1g02738 690 SUPERFAMILY alpha/beta-Hydrolases 85 223 IPR029058 -
Spst1g02738 690 Gene3D alpha/beta hydrolase 88 274 IPR029058 -
Spst1g02738 690 MobiDBLite consensus disorder prediction 271 297 - -
Spst1g02738 690 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 301 640 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02738 Spst-Chr1 35822712 35831677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02738 265 642 bZIP Transcription Factor Family AT2G36270 48.276 4.63e-95 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02738 K14432 - gmx:100818567 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02738 1 35822712 35831677 Spst11g01201 11 36326003 36332061 ECH
Spst1g02738 1 35822712 35831677 Spst1g02738 1 35822712 35831677 ECH
Spst5g00641 5 5509936 5516793 Spst1g02738 1 35822712 35831677 ECH