Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02721 ATGGGAAGCCCACCAGTGAGCTCAAACATATCGTTTCCACCAGCAGACATTGATGGGGAACTGAATCCTGCATCTGGCAATAATGTTCATGTTGAAGTTGACCCTGTATCATCAGAGGTAGCTGCCACAAAACCCTCCAAGGAACAAACTGAGGTGAAACAAGAGAAAAAGGAAGGGAAAAAGATGGATGCCATACGAACACTAAAGTCAGCCATTATTGTTTCAGGCATAATTGTGGCTGTGGCAGGTGTTGCCTTTGCTGTGAACCCGCGCGCTCTCGCTCTCTCTTGTGGTCCACTTCAGGGTTGGCGCTTAGTTTCTCGGCAATTGGCTTCTGAATTCAATCTGAATATGGACTTGTCAAATCCTGCAGCCTTTGTCAATGCAGAACTATTGCACTTTTATATTGGAAGGAGGGTAAGGGCCCTGATGCAGGTTGTGCGATCTGATGGTGGAGTTGTCATTGGAAAATCAACAGATGAGAAACAGCTAGTTGTAAAAGGATCACCCCCTGCTCCTCTTACAACTTTTGTGGAAGTTTTTGGTATTGTAAACAGTGATAAGTCAATTGGTGCTGAGATATGGACCAATTTTGGCGATTCCATTGATATGTTCAGCTACAACAAGCTTTGTCAGCTTGCAAATGGAGAACTTAAACAGCTGTTCCTGTGA 672 0.4449 MGSPPVSSNISFPPADIDGELNPASGNNVHVEVDPVSSEVAATKPSKEQTEVKQEKKEGKKMDAIRTLKSAIIVSGIIVAVAGVAFAVNPRALALSCGPLQGWRLVSRQLASEFNLNMDLSNPAAFVNAELLHFYIGRRVRALMQVVRSDGGVVIGKSTDEKQLVVKGSPPAPLTTFVEVFGIVNSDKSIGAEIWTNFGDSIDMFSYNKLCQLANGELKQLFL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02721 223 Gene3D - 118 223 IPR012340 -
Spst1g02721 223 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 115 223 - -
Spst1g02721 223 CDD RPA3 123 222 - -
Spst1g02721 223 Pfam Replication factor A protein 3 121 216 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Spst1g02721 223 SUPERFAMILY Nucleic acid-binding proteins 122 222 IPR012340 -
Spst1g02721 223 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02721 Spst-Chr1 35715447 35718925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02721 118 223 Core DNA Replication Machinery Family AT4G18590 64.151 9.64e-48 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02721 K10740 - gmx:100306641 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02721 1 35715447 35718925 Spst1g02721 1 35715447 35718925 ECH