Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02717 ATGCTAGGGAAAAGGATGGTATCATTCAAGAAACTGGCCAAAAAGGTGAAGGGTGTTGGTGGACTTGACCCTGACCCTGCTCATCATGAGGGTTTGCTCAAGAAATATGAAGAAAAATGTGACACTAACACACCCCCAACTGGGTTCTTTGCACTTTATGTTGGAGAAGAGCGTCAAAGATACGTGGTTCCAACCCGCTACCTTTCACACCCCTTATTCAAGATGCTGTTGGAGAAGGCTTACAATGAGTTTGGGTTTTCGCAGAGGAATGGACTAGTGGTTCCATGCTGTGTTTCCACGTTCGAGGAGGTGGTGAATGCTGTAGAATGCAACAACGGAAAGTTTGACTTGGGAAAGTTTTTTGCAGAATTTGTTTGA 378 0.4471 MLGKRMVSFKKLAKKVKGVGGLDPDPAHHEGLLKKYEEKCDTNTPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFGFSQRNGLVVPCCVSTFEEVVNAVECNNGKFDLGKFFAEFV 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02717 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 104 IPR003676 GO:0009733
Spst1g02717 125 Pfam Auxin responsive protein 35 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02717 Spst-Chr1 35685327 35685704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02717 37 111 Calmodulin-binding Proteins AT5G20810 49.367 2.17e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02717 K14488 - gmx:100776885 223.787