Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02689 ATGGGCAAGAAAATGAAGCTTCCTTCCCTCCTCCATAAGAACTCAGCTCCCACCACCAAAACTTCTTCCACTTCCTGGCCGTGGCCCTCCTGCCACCAACCCCGAACCCTCTCCTTTCGAGCCCAGAACGACGCCGCTTTCAAAACCATCAACGCAGCCTACTTGGACACCCCGGAGAGCTCCCACTCCTTCTTCACAGTCTCCCCTGACTCTGGAAGCTTCTCAACAGCATCAGAAGAAGATTCTAGAAGACCTGATTCTCTTGAGACCCTCATTCGTCACTTGCCTTCAGATCGTTTGTTCTTCCACCCTGACCAGACAAGCTCCATATTAGAGTCCAAAGCAGGAACTTCAACGCCAATACCACCAGAAACAACTACGACCACAACAACAGCACTAACTACAACGTTGCCGTTCAAAGACAGCGTGGTCATGTCCGTGGAGTCTCAGGACCCTTACGTGGACTTCCGCAGGTCCATGGAGGAGATGGTGGAGGCGCAGTGCGTTGAGGACTGGGAAGGTCTTCAAGAGCTTTTGTGTTGGTATTTGAAAGTCAATGGAAAAAGCAACCATGGTTATATTGTTGGTGCTTTCATTGATTTATTGGTAGCTTTATCTTCCACGGCCTCTCCTTCTAATATTAACACTCATTCTCCTTCTTCCCCTTTATCTTTCTATAGTTCTTCTCTTTCTTCCTCTTGCAGCACTCGCTGTGTTTCCTGTTTGGAAGTTGAGGACGAGGTTGATATAGCTACCCCTGGTTCTTCTTTCTTGTTAGAACAAGTTCGGGAAGATGGAACTTCATCTTCTGTTTCCTCTTTGAATTAA 828 0.4771 MGKKMKLPSLLHKNSAPTTKTSSTSWPWPSCHQPRTLSFRAQNDAAFKTINAAYLDTPESSHSFFTVSPDSGSFSTASEEDSRRPDSLETLIRHLPSDRLFFHPDQTSSILESKAGTSTPIPPETTTTTTTALTTTLPFKDSVVMSVESQDPYVDFRRSMEEMVEAQCVEDWEGLQELLCWYLKVNGKSNHGYIVGAFIDLLVALSSTASPSNINTHSPSSPLSFYSSSLSSSCSTRCVSCLEVEDEVDIATPGSSFLLEQVREDGTSSSVSSLN 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02689 275 MobiDBLite consensus disorder prediction 12 29 - -
Spst1g02689 275 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 58 207 IPR038933 GO:0045892
Spst1g02689 275 NCBIfam uncharacterized plant-specific domain TIGR01568 143 207 IPR006458 -
Spst1g02689 275 ProSiteProfiles OVATE domain profile. 143 204 IPR006458 -
Spst1g02689 275 MobiDBLite consensus disorder prediction 1 29 - -
Spst1g02689 275 MobiDBLite consensus disorder prediction 66 86 - -
Spst1g02689 275 Pfam Transcriptional repressor, ovate 149 205 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02689 Spst-Chr1 35358598 35359425 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst1g02689 Ovate 5.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02689 - - vun:114179778 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02689 1 35358598 35359425 Spst10g01491 10 15579630 15580358 ECH
Spst1g02689 1 35358598 35359425 Spst1g02689 1 35358598 35359425 ECH
Spst1g02689 1 35358598 35359425 Spst7g00132 7 1002878 1003558 PCT