Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02688 ATGTCTGGTTCCAGAAAGAAGCTTCTTCTGAACACCGTGTCCGTGAAACTAGGCTGCGGCACCTGCAGAAGACCAAAGCTTTCTCGCATATTCCACCCAAAGCCTAAACCCACGAACCAACCCACTTACCAAAACCACAAAAAACATTACAACAATTTCTCGTCTTCCTCTTCGGCCCAATGGGGTGACAGCACCAGCACCACCCCCACCAACACCAATACCAACGCCACATTCTCTCCCTACGTTGATTCCTCACACTTTTCTGACTCAGATTCTTACGTGAAGGCTGCGAGAACAGTCGGGGGTTTGGGAAGAGCTGGGAAAGAAGGGGTGGCCGTGGAGAAAGACTCCGAGGACCCTTATCTGGATTTCAGACATTCCATGCTGCAAATGATATTGGAGAACGAGATATACTCGAAGCAAGATCTCAGAGAGCTTTTGAGTTGCTTCCTTCAGCTGAATTCACCGCATCATCATGGGGTTATAGTCAGGGCTTTCACTGAGATCTGGAATGGCGTCTTCTCTGTCAGGTCCAATTCACACATCAACCGTAAGCCACGTGAGTTCTAG 570 0.4895 MSGSRKKLLLNTVSVKLGCGTCRRPKLSRIFHPKPKPTNQPTYQNHKKHYNNFSSSSSAQWGDSTSTTPTNTNTNATFSPYVDSSHFSDSDSYVKAARTVGGLGRAGKEGVAVEKDSEDPYLDFRHSMLQMILENEIYSKQDLRELLSCFLQLNSPHHHGVIVRAFTEIWNGVFSVRSNSHINRKPREF 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02688 189 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 45 175 IPR038933 GO:0045892
Spst1g02688 189 MobiDBLite consensus disorder prediction 35 74 - -
Spst1g02688 189 ProSiteProfiles OVATE domain profile. 113 172 IPR006458 -
Spst1g02688 189 NCBIfam uncharacterized plant-specific domain TIGR01568 111 171 IPR006458 -
Spst1g02688 189 Pfam Transcriptional repressor, ovate 117 173 IPR006458 -
Spst1g02688 189 MobiDBLite consensus disorder prediction 28 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02688 Spst-Chr1 35346120 35346689 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst1g02688 Ovate 3.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02688 - - gmx:106797222 308.916