Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02678 ATGTCGCAGTTGAACGGAGCCTACTACGGCCCCGCTATTCCGGCGCAGAAGTCCTACAACCGCCCAGGGAGGGGCGGTGTCTGCGGCTGCTGCTGTGGCTGCCTCTTCAGCCTCATCTTCAAGCTCATCCTCACGGTAATCATCATCGTGGGTATCGCCGCGTTCCTCTTCTGGCTCATAGTTCGTCCCAACGTGGTGAAGGTCCACGTCACTGACGCCACGCTGACGCAGTTCAGCTACAGCAACAACACCCTCCGCTACGACCTCGCCCTCAACATCACCGTGCGCAACCCCAACAAGAGGCTGGGCATCTACTACGACAACATTGAGGCGCGCGCATTGTTCCACGACGCCAGGTTCGATTCCCAGTACCCGGATCCCTTCTACCAGGGGCACAAGACCACGAACGTGCTGAACCCCGTGTTCAAGGGGACGCATGTGCTGGCTCTCGACGCTGACCAGAGCGCCGAATGGAACAAGGAGAACGCCACTGGGTTGTACCAGATCGATGTGAAGATGTACCTGAGGGTGAGGTTCAAGTTGGGCGTGTTCAAGACCAAGACGGTCAAGCCTAAAGTTAGCTGCGACTTGCTCGTGCCTCTGAAAGGAAGCGCCACCGTCTTTGAAACCACCAAGTGCGACTGGAGTCGCTGA 654 0.5795 MSQLNGAYYGPAIPAQKSYNRPGRGGVCGCCCGCLFSLIFKLILTVIIIVGIAAFLFWLIVRPNVVKVHVTDATLTQFSYSNNTLRYDLALNITVRNPNKRLGIYYDNIEARALFHDARFDSQYPDPFYQGHKTTNVLNPVFKGTHVLALDADQSAEWNKENATGLYQIDVKMYLRVRFKLGVFKTKTVKPKVSCDLLVPLKGSATVFETTKCDWSR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02678 217 PANTHER OS05G0367900 PROTEIN 28 202 IPR044839 GO:0098542
Spst1g02678 217 Pfam Late embryogenesis abundant protein 92 195 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02678 Spst-Chr1 35229779 35230432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02678 60 201 SNARE and Associated Proteins AT1G32270 38.194 4.32e-24 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02678 - - gmx:100793187 362.459