LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g02677	ATGGCCGATAAGCAACCCCAATTGAACGGTGCGTATTACGGTCCCGCCATTCCCCCGGCGGAGCCACCACGCTACCGCCCTCACCGCGAGAGAAGCTGCTGTTGCTGCCTCTTCGGAATCTTGTGGAAGATTCTGGTTGCACTCATCGTGATTGTTGGCCTCGCAATCCTCATATTCTGGCTGGTGGTTCAACCCCGCTCCTTCAAGTTCCATGTCACGGAAGCTGAGCTAACCCAATTCGAGTTCAACTCCAACAACAACACCCTCCACTACAACATGGTTCTCAACTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATCTACTACGATAAAGTAGAGGCATTAGCATTCTACGAGGATGCCAGGTTCTCGAATTACGATGTGATAACGCACATGAACTCCTTCCGCCAGTACAAGAAGAGCAGCAGCCCCATGAGCGCTGTTTTCTCAGGGTATCGAGTGCTGACACTAGACAACGATCAAGTTAATCAGTTGAACCAAGACAAGAATGATGGGGTTTACGACATCTATGTGAAGCTCTACTTCAGGATTAGATACAGGCTCGGAGACGTCATATCCGGTGACTTGAAGCCCAAGGTTAAATGTGACCTCAAAGTTCCCTTCGGTAACAATGGCACCGTAACTTTGTTTCAGGCCACCAAGTGCGATGTCGATTACTAG	684	0.4985	MADKQPQLNGAYYGPAIPPAEPPRYRPHRERSCCCCLFGILWKILVALIVIVGLAILIFWLVVQPRSFKFHVTEAELTQFEFNSNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDARFSNYDVITHMNSFRQYKKSSSPMSAVFSGYRVLTLDNDQVNQLNQDKNDGVYDIYVKLYFRIRYRLGDVISGDLKPKVKCDLKVPFGNNGTVTLFQATKCDVDY	227

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g02677	227	PANTHER	OS05G0367900 PROTEIN	32	210	IPR044839	GO:0098542
	Spst1g02677	227	Pfam	Late embryogenesis abundant protein	97	203	IPR004864	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g02677	Spst-Chr1	35225485	35226168	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst1g02677	62	210	SNARE and Associated Proteins	AT1G32270	32.886	1.22e-19	84.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g02677	-		-	gmx:100807701	405.601