Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02675 ATGGCCGATAAGCAACCCCACTTGAACGGTGCTTATTACGGTCCCGCCATTCCCGCCGGGGAGCCACCACGCTACCGCCCTCAACGTGAAAGAAGTTGCTGTTGCTGCCTCTTCGGAATCTTGTGGAAGATACTGGTTGCACTCATCGTGATTGTTGGCCTCGCAATCCTCATATTCTGGCTGGTGGTTCAACCCCGCTCCTTCAAGTTCCATGTCACGGAAGCTGAGCTAACCCAATTCGAGTTCAACTCCAACAACAACACCCTCCACTACAACATGGTTCTCAACTTCACTGCACGTAACCCCAACAAGAAGCTTAGCATCTACTACGATAAAGTAGAGGCATTAGCATTCTACGAGGATGCCAGGTTCTCGAATTACGATGTGATAACGCACATGAACTCCTTCCGCCAGTACAAGAAGAGCAGCAGCCCCATGAGCGCTGTTTTCTCAGGGTATCGAGTGCTGACACTAGACAATGATCAAGTTAATCAGTTGAACCAAGACAAGAACGATGGGGTTTACGACATCTATGTGAAGCTCTACTTCAGGATTAGATACAGGCTCGGAGACATCATATCCGGTGACTTGAAGCCCAAGGTTAAATGTGACCTCAAGGTTCCCTTCGGTAACAATGGCGCCGTAACTTTGTTTCAGGCCACCAAGTGCGATGTCGATTTCTAG 684 0.4912 MADKQPHLNGAYYGPAIPAGEPPRYRPQRERSCCCCLFGILWKILVALIVIVGLAILIFWLVVQPRSFKFHVTEAELTQFEFNSNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDARFSNYDVITHMNSFRQYKKSSSPMSAVFSGYRVLTLDNDQVNQLNQDKNDGVYDIYVKLYFRIRYRLGDIISGDLKPKVKCDLKVPFGNNGAVTLFQATKCDVDF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02675 227 Pfam Late embryogenesis abundant protein 97 203 IPR004864 -
Spst1g02675 227 PANTHER OS05G0367900 PROTEIN 32 209 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02675 Spst-Chr1 35169831 35170514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02675 62 210 SNARE and Associated Proteins AT1G32270 32.886 7.92e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02675 - - gmx:100807701 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02675 1 35169831 35170514 Spst7g00148 7 1101948 1102619 PCT