Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02638 ATGGGAAACAACTGCGTCGGGTCAAAAACCTCGGAATATGCACTGTTTTCCTGTGTCCTTCCGAGTTCATTCTTGTGGCTTCATTATCATCAAACGAGGGTGGTCACGGAAATTTCTGATGCACCTTCACTTGTGACTAAAATTGAAGACACCAATGCTCTAGAGAATGTTCAAGCAAAGCCTCCACGAGTAGTGAAAATTAACAAAGAGATTAACATGCCTTCAGAGCCTGCAAATAAAAAAATACTCCATAAAGTCAAGAGGGTAGCAATAGGGCTTCAAGAAGAGTCAATTTTGAAGAGAAAAAGTGGTCACTTTAAGGAGTACTATAATTTGGGAGAAGAGCTTGGGAAGGGGCAATATGGAACAACATTCCTTTGTACTGAGAAAGCAACTGGGAAAAAGTACGCTTGCAAATCCATTCCAAAAGTTAAACTGCTGATAGATGAAGACGTGGAAGATGTGAGGAGGGAGATTGAGATAATGCATCACTTGGAGGGGTGTCCTAATGTGATATCAATTAAAGGGGCTTATGAAGATGGTGTTGCAGTTCATGTTGTGATGGAGTTATGTGGAGGGGGTGAACTTTTTGATAGGATTATGGAAAGGGGGCACTACACAGAGAGAAAAGCAGCTAAACTTGCAAGGACTATAGTTAGTGTTATAGAGGGTTGCCACTCCCTTGGGGTGATGCATCGTGATCTTAAGCCTGAGAATTTTCTTTTCGTAGATGGGAATGAAGAGTCCACACTTAAGGCCATAGATTTTGGATTGTCTGTTTTCTTCAAACCAGGAGACGTTTTTAGGGACGTGGTTGGAAGTCCTTATTATATCGCACCTGAAGTTCTACGAAGACATTATGGTCCAGAAGCTGATGTGTGGAGTGCAGGTGTGATCATATACACTCTTTTATGCGGAACACCTCCATTTTGGGGTGAATCGGAGCAAGAGATCTTTGAAGAAGTTTTGCATGGTGACCTTGATTTCTCTTCAGATCCTTGGTCAAATATCTCTGAAAGTGCTAAAGACTTGGTTAGGAAGATGCTTGTTAGAGATCCTAGAAAACGGATAACAGCACATGAAGTTCTTCGTCACCCTTGGGTTCAAGTCGATGGAGTTGCTCCAGGGAAGCCTCTTGATTCTGCAGTTTTGAGTCGACTGAAGCAGTTTTCTGTAATGAACAAGCTAAAGAAAATGGCTCTTAAAGTTATTGCAGAGAATCTCTCGGAAGAAGAAATTTCTGAACTGAAAGTAACGTTTAAGATGATAGACACAGACAACAGTGGTCAAATTACTTTAGAAAAGCTCAAGACTGGATTGGAAATGCTTGGTAATAATCTCAGTGAATCAGAAATTTTGGATCTAATGCAAGCTGCAGATGTTGATCACAATGGCACAATTGACTATAGAGAATTCGTAGCTGCAACATTGCATATAAACAAAATTGACAGAGAAGATCATTTAGTTGCAGCTTTTTCATTTTTTGATAGAAATGGAAGTGGCTACATCACTCAAGATGAGCTTCAAAAAGCTTGTGAAGAATTTGGTATGGAGAATGTATGCTTCGAAGAAATTATCCAAGAAGCTGATCAGAATAACGATGGCAGAATAGACTACAATGAATTCGTGGCTATGATGCTGAGAAGCAGTACAGATTTAGGTAGAAACAGCATAAAAGGTGGCACTGATTTTAGCATTGGATTTAGGGAGGCACTATCAGTGTGGTTTTTGACTCCTTTGTCTGCTTTCAAGAATTCCGTAACCATTCTGATGAGGACAATGGAAGATGCACCGAACTCAAGTCAGTGCCTTTTAGGGCCTCAATTTGTGGGGCTTCAAAATCCAATCAGACATATGAGGAATGTTGTCACTACCCTTGTTACCTTCATGGTTAGCTATCAAAGGGAGAACAAATTGGATCGTGTGAAGTGTAACGAAACAAAGAAGGGAAAGGTTCACGTTGTGACTGCTCACGCGCGGTTGGTGGGAGGTGGTGGGGTACTTGTCAAGGTTGGCCTAATGTGCCACCAATCAAGTGAATCTGATCTGTGTATTAAGTTTGCGAAGAGAGTGAGGGAAATGAAGAAATTATTGTTGGATTGGATGCAGAAACTAATCCTTACGCAACTCGCAATGGAATCTGAAAACGGGGTTGCTGTGGAGGAAGAGAAACGTGTTATTGGAGTAACAACAAAGGTGGAGAATATAAAGAAAGAAGTTGAGAAGGACTACAATGGTGCAGAAATTCAGACAAAGAATGAAGTATCTAAACCCACAGTGGAAGCTAAAGGCCCCATTTCTGCTGCAGTTGAAGCCTCAAATAAAAATTCAAAAGGCGCTATCAAGGAAACTGGTGATAGAGCAAGTGTTGCTTCCAAGAGCAACAAATATGCCAAAGATAAGCATAAGCCCATTTTGAAGGATCTAAGCTCAATATCTCAAAAACAAAGGCCATCCCTTTCCCAAAGCCTTTCTTTCCCATCCAAATCATCTGGTGAAGATGCTATGAAGAAAAGCATTGATGGGTATCTTGTGAAGACAAAAGTTAAACACGTTCAAGGTAATGGGATTAGAGGTGAGGCCCCCATTCGCCATTTAAACAAATCCACAAACTCTGGAGTGAACTCACTAGCAAAAAGCAACACTGGCAGACCTGGTTTGAAACGCTCTGCGTTTGGAAGGACTACCCCAGTTACTCCAGTCACCAAGAGCCAAATTTCTGAGGCATCGTTATTCGCTGATCATGTGTCAAACACAGCAAAAACTGTAAAAGCAAACAAAGATGATGATGATTGTCACTCCACAACTTCAAGTGCTACTGCTCGTCTGAGAAGCAGCGGAATAGGGTTTTCCTTTAGATTGGAAGAAAGAGCTGAAAAGCGAAAGGAGTTTTTCTCAAAATTGGAGGAAAAAATTCTAGCCAAGGAAGCAGAGAAAACTAACCTACAAGCAAAATCAAAGGAAAACCAAGAGGCAGAGATCAAGCTATTGAGGAAGAGCCTGACATTCAAAGCCACTCCAATGCCAAGTTTCTATAAGGAACCCCCTCCAAAAGTTGAACTGAAGAAGATACCAACAACACGTGCAAAATCCCCAAAGCTTGGTAGGCACAAAGAACCTGCAATGAACAACAATTCAAGAGAAGATAAGTCTTGCTCCAGTCCGAAACAACAGCAAAATGATTCAAACGAGGTTAAAGGTCACAAGGATGTGATTTCAAAGAAACCAATCCGAAAAACCCAATCCAAGCTGAATTCTCAAGAAAATATAACCACAGAAAACAAAGAAGAATGCCAAGTTCCACATGATAACAAGTCTGAATGCAAAAATGACATGGAGTCACAATCTGAAACAGTTCATGCACCAAATAGTGCACTGCTTCTAAATTCGACCACACCTGAGTTTGTGTCATATGAGGTTGTTGTTGGAGTGTAG 3435 0.4099 MGNNCVGSKTSEYALFSCVLPSSFLWLHYHQTRVVTEISDAPSLVTKIEDTNALENVQAKPPRVVKINKEINMPSEPANKKILHKVKRVAIGLQEESILKRKSGHFKEYYNLGEELGKGQYGTTFLCTEKATGKKYACKSIPKVKLLIDEDVEDVRREIEIMHHLEGCPNVISIKGAYEDGVAVHVVMELCGGGELFDRIMERGHYTERKAAKLARTIVSVIEGCHSLGVMHRDLKPENFLFVDGNEESTLKAIDFGLSVFFKPGDVFRDVVGSPYYIAPEVLRRHYGPEADVWSAGVIIYTLLCGTPPFWGESEQEIFEEVLHGDLDFSSDPWSNISESAKDLVRKMLVRDPRKRITAHEVLRHPWVQVDGVAPGKPLDSAVLSRLKQFSVMNKLKKMALKVIAENLSEEEISELKVTFKMIDTDNSGQITLEKLKTGLEMLGNNLSESEILDLMQAADVDHNGTIDYREFVAATLHINKIDREDHLVAAFSFFDRNGSGYITQDELQKACEEFGMENVCFEEIIQEADQNNDGRIDYNEFVAMMLRSSTDLGRNSIKGGTDFSIGFREALSVWFLTPLSAFKNSVTILMRTMEDAPNSSQCLLGPQFVGLQNPIRHMRNVVTTLVTFMVSYQRENKLDRVKCNETKKGKVHVVTAHARLVGGGGVLVKVGLMCHQSSESDLCIKFAKRVREMKKLLLDWMQKLILTQLAMESENGVAVEEEKRVIGVTTKVENIKKEVEKDYNGAEIQTKNEVSKPTVEAKGPISAAVEASNKNSKGAIKETGDRASVASKSNKYAKDKHKPILKDLSSISQKQRPSLSQSLSFPSKSSGEDAMKKSIDGYLVKTKVKHVQGNGIRGEAPIRHLNKSTNSGVNSLAKSNTGRPGLKRSAFGRTTPVTPVTKSQISEASLFADHVSNTAKTVKANKDDDDCHSTTSSATARLRSSGIGFSFRLEERAEKRKEFFSKLEEKILAKEAEKTNLQAKSKENQEAEIKLLRKSLTFKATPMPSFYKEPPPKVELKKIPTTRAKSPKLGRHKEPAMNNNSREDKSCSSPKQQQNDSNEVKGHKDVISKKPIRKTQSKLNSQENITTENKEECQVPHDNKSECKNDMESQSETVHAPNSALLLNSTTPEFVSYEVVVGV 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02638 1144 Gene3D Transferase(Phosphotransferase) domain 1 186 375 - -
Spst1g02638 1144 FunFam Calcium-dependent protein kinase 1 isoform A 112 195 - -
Spst1g02638 1144 ProSiteProfiles Protein kinase domain profile. 110 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02638 1144 FunFam Calcium-dependent protein kinase 1 376 550 - -
Spst1g02638 1144 ProSitePatterns EF-hand calcium-binding domain. 530 542 IPR018247 -
Spst1g02638 1144 ProSiteProfiles EF-hand calcium-binding domain profile. 522 552 IPR002048 GO:0005509
Spst1g02638 1144 FunFam Calcium-dependent protein kinase SK5 196 380 - -
Spst1g02638 1144 ProSitePatterns EF-hand calcium-binding domain. 496 508 IPR018247 -
Spst1g02638 1144 CDD EFh 487 546 IPR002048 GO:0005509
Spst1g02638 1144 MobiDBLite consensus disorder prediction 773 835 - -
Spst1g02638 1144 MobiDBLite consensus disorder prediction 1078 1094 - -
Spst1g02638 1144 CDD EFh 415 475 IPR002048 GO:0005509
Spst1g02638 1144 ProSiteProfiles EF-hand calcium-binding domain profile. 483 518 IPR002048 GO:0005509
Spst1g02638 1144 PANTHER SERINE/THREONINE-PROTEIN KINASE 98 542 - -
Spst1g02638 1144 MobiDBLite consensus disorder prediction 809 832 - -
Spst1g02638 1144 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Spst1g02638 1144 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Spst1g02638 1144 ProSitePatterns EF-hand calcium-binding domain. 460 472 IPR018247 -
Spst1g02638 1144 SUPERFAMILY Protein kinase-like (PK-like) 108 369 IPR011009 -
Spst1g02638 1144 Coils Coil 965 995 - -
Spst1g02638 1144 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Spst1g02638 1144 MobiDBLite consensus disorder prediction 1016 1045 - -
Spst1g02638 1144 SUPERFAMILY EF-hand 397 548 IPR011992 -
Spst1g02638 1144 SMART efh_1 415 443 IPR002048 GO:0005509
Spst1g02638 1144 SMART efh_1 451 479 IPR002048 GO:0005509
Spst1g02638 1144 SMART efh_1 487 515 IPR002048 GO:0005509
Spst1g02638 1144 SMART efh_1 521 549 IPR002048 GO:0005509
Spst1g02638 1144 Pfam Protein kinase domain 110 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02638 1144 SMART serkin_6 110 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02638 1144 MobiDBLite consensus disorder prediction 1095 1114 - -
Spst1g02638 1144 Gene3D - 376 550 - -
Spst1g02638 1144 MobiDBLite consensus disorder prediction 1046 1061 - -
Spst1g02638 1144 MobiDBLite consensus disorder prediction 1062 1077 - -
Spst1g02638 1144 MobiDBLite consensus disorder prediction 793 808 - -
Spst1g02638 1144 Pfam EF-hand domain pair 415 476 IPR002048 GO:0005509
Spst1g02638 1144 Pfam EF-hand domain pair 488 546 IPR002048 GO:0005509
Spst1g02638 1144 CDD STKc_CAMK 110 367 - -
Spst1g02638 1144 Gene3D Phosphorylase Kinase; domain 1 89 185 - -
Spst1g02638 1144 MobiDBLite consensus disorder prediction 865 883 - -
Spst1g02638 1144 Pfam Targeting protein for Xklp2 (TPX2) domain 950 1019 IPR027329 -
Spst1g02638 1144 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
Spst1g02638 1144 MobiDBLite consensus disorder prediction 863 900 - -
Spst1g02638 1144 MobiDBLite consensus disorder prediction 1007 1117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02638 Spst-Chr1 34799165 34809323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02638 86 569 EF-hand Containing Proteins AT5G04870 74.021 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst1g02638 Pkinase 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02638 K13412 - gmx:100814475 984.171