Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02630 ATGTATATTGCAGCGGAGGATATTGAAGCCGGAACTCATAAGCCCAAGTTTCAGACAGAACCTACTCTGCCAATATATCTGAAGTTTACAGATGTGACCTACAAGGTAGTGATTAAAGGCATAACTGCAACTAAGGAGAAGGATATCTTGAAGGGGATCACTGGTTCTGTTAATCCTGGGGAAGTTTTGGCATTGATGGGTCCTTCAGGAAGTGGAAAGACATCTTTGTTAAATCTGCTAGGAGGAAGGTTAATTCAATCCACAATTGGAGGCTCTATCACTTACAATGACCAACCTTATTCCAAGTTTCTAAAGAGCAGGATTGGATTCGTGACACAAGATGATGTTCTGTTTCCTCACCTTACTGTAAGAGAAACATTGATGTATGCTGCCCGCTTAAGATTGGCAAATACGTTAACGAAAGAACAAAAGGAAAAACGAGCTTTAGATGTCATCGAAGAGCTGGGATTGGAGAGGTGCCAAGACACTATGATAGGAGGTTCCTATGTTCGAGGAGTATCCGGTGGAGAGAGGAAGAGGGTTTGTATCGGCAATGAGATCATAATCAACCCCTCTCTTCTGTTTCTTGATGAACCAACTTCTGGTTTGGATTCTACAACAGCTTTAAGGATAGTTCAGTTGCTACAAGACATAGCAGAGGCTGGTAAAACCGTTGTGATAACAATCCATCAACCATCAAGTAGACTCTTCCATAAATTTGATAAGTTGATCCTTCTAGGAAAAGGGAGCTTGCTTTACTTCGGAAAAGCATCTGAAGCAATGGACTATTTCCAGTTTATAGGGTGTGCACCTCTTATTTCCATGAACCCAGCAGAGTTTTTATTAGACCTTGCAAATGGAAACGTAAACGATATTTCTGTACCATCAGAGTTAAAGGATAAAGTGCAGGTGGGAAATGCTGAAGTTGAAACATGCAATGACAAACCATCTGCTTCAACTGTACAAGAGTATCTGGTGGAGGCATATGATTCTCGTGTGGCAGAAATAGAGAAGACAAGGTTAATGATTCCTGTCCCCCTTGATGAAGAACTGAAGTCTAAGGTTTATTCTTGCAAAAGAGAGTGGGGGGCAGGTTGGTTTGAGCAATTTTCTATATTATTTTCAAGAGGATTGAAAGAAAGGAGGCACGACTATTTTAGCTGGTTGAGAATCACCCAAGTTCTTTCCACTGCAGTCATCTTAGGATTACTTTGGTGGCAATCAGATGCTAACAACCCAAATGGTTTGCAAGATCAGGCAGGACTTCTTTTCTTTATTGCTGTATTTTGGGGATTTTTTCCTGTCTTCACTGCAATATTCACATTTCCTCAAGAGCGGGCCATGCTGACTAAGGAACGAACAACGGATATGTACAGACTAAGTGCATATTTCGTGGCCAGAACTACAAGTGACCTTCCACTAGACCTAGTGTTACCAGTGTTTTTCCTCGTTGTTGTTTATTTCATGGCCAGTTTGAGACTCAGTGCAGGTCGTTTTTTCCTTAGTATTCTTACAGTTTTTCTCTGCATCATAGCAGCTCAGGGACTTGGACTTGCAATTGGGGCTACACTAATGGACTTGAAAAGGGCAACAACTTTGGCTTCAGTAACTGTGATGACTTTCATGCTGGCTGGAGGATTTTTTGTGCAGAAAGTCCCCGTATTCATATCTTGGATTCGCTACCTCTCTTTCAACTACCATACGTATAAACTTCTACTCAAGGTTCAATATGAACACATTACACCTACCATAAATGGGATCACACTTGACAGTGGATTCACAGAGGTTGCTGCTCTGCTAGCAATGGTTTTTGGTTACCGTTTGTTGGCATATCTCTCCTTGCGGCGGATGAAACTTCAAGCTGGAAATTAA 1872 0.4151 MYIAAEDIEAGTHKPKFQTEPTLPIYLKFTDVTYKVVIKGITATKEKDILKGITGSVNPGEVLALMGPSGSGKTSLLNLLGGRLIQSTIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVRETLMYAARLRLANTLTKEQKEKRALDVIEELGLERCQDTMIGGSYVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQLLQDIAEAGKTVVITIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMDYFQFIGCAPLISMNPAEFLLDLANGNVNDISVPSELKDKVQVGNAEVETCNDKPSASTVQEYLVEAYDSRVAEIEKTRLMIPVPLDEELKSKVYSCKREWGAGWFEQFSILFSRGLKERRHDYFSWLRITQVLSTAVILGLLWWQSDANNPNGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERTTDMYRLSAYFVARTTSDLPLDLVLPVFFLVVVYFMASLRLSAGRFFLSILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPVFISWIRYLSFNYHTYKLLLKVQYEHITPTINGITLDSGFTEVAALLAMVFGYRLLAYLSLRRMKLQAGN 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02630 623 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 611 - -
Spst1g02630 623 SMART AAA_5 59 250 IPR003593 GO:0016887
Spst1g02630 623 Pfam ABC-2 type transporter 368 577 IPR013525 GO:0016020|GO:0140359
Spst1g02630 623 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 273 IPR003439 GO:0005524
Spst1g02630 623 CDD ABCG_EPDR 24 255 - -
Spst1g02630 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 267 IPR027417 -
Spst1g02630 623 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524|GO:0016887
Spst1g02630 623 Gene3D - 26 267 IPR027417 -
Spst1g02630 623 FunFam ABC transporter G family member 22 37 267 - -
Spst1g02630 623 Pfam ABC transporter 50 201 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02630 Spst-Chr1 34743010 34747189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02630 13 302 Calmodulin-binding Proteins AT2G36910 26.510 9.67e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02630 K05681 - gmx:100796008 1121.3