Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02624 ATGGGTTCTCTCCCCCACGTGATAGAGGATTGCTTGGGCTTCCTCCAACTCTATAGCGACGGTTCTATATCACGTTCCAACGATATAGAGTTCAAAATTTCACCCGTTCAAGATCACTCCATAACCTTCAACGACTACCTATTCCACAAAAGATTCAACCTTTCTCTTCGCTTCTACAAACCCCAACAACACGTAACACTCAACAATCATAACAAGCTTCCTATTCTCATTTTCCTTCACGGTGGAGGCTTCTGCTTCGGTTCGCGCACCTGGCCCCATATTCACAACTGTTGCACCCGCCTAGCCTCCGCCCTCCAAGCGGCAGTCCTCTCGCCGGACTACCGCCTCTCGCCCGAACACCGGCTTCCGGCGGCGCTGGACGACGCCGTGGAGGCGGTGAGGTGGCTCCAGAGGCAGGGGCTGAGGCTGAAGGAAGACGAAAACGGTGGGGACGCCTGGCTGAGTCGTGACCTTGACTTTGACCGCGTGTTTGTCGTCGGTGACTCGTCTGGTGGGAACATTGCGCACCACCTCGCGGTTCGCTTGGGGCCCGGTTCGAAAGAGATGGACCCGGTTCGAGTACGAGGTTACATGTTGTTTGCGCCGTTTTTTGGCGGAGAGGTTCGGACCAAGTCCGAGGAAGGTCCACCAGAGCACATGTTGAACCTTGAGTTATTAGATAGATTTTGGAGACTGTCAATTCCTTCTGGAGAATCCAGAGACCACCCATTGGCGAATCCATTTGGAGCTGGAAGCCCAAATCTTGAAGAAGTGAAGCTTGATCCAATTTTGGTGATAATTGGTGGCAATGAATTGCTTAAGGATAGAGCAGAAGACTACGCTACTAGGTTAAAAAAACTAGGTAAAGACATTGAATACGTTGAGTTTGAGGGGTGTGAGCATGGGTTTTTCACTCACGATTCATACTCATCACAAGTTGCAGAAGAGGTCATCCAAATCCTTGAACGATTCATGCTTCAAACTTCTACTTAA 993 0.5035 MGSLPHVIEDCLGFLQLYSDGSISRSNDIEFKISPVQDHSITFNDYLFHKRFNLSLRFYKPQQHVTLNNHNKLPILIFLHGGGFCFGSRTWPHIHNCCTRLASALQAAVLSPDYRLSPEHRLPAALDDAVEAVRWLQRQGLRLKEDENGGDAWLSRDLDFDRVFVVGDSSGGNIAHHLAVRLGPGSKEMDPVRVRGYMLFAPFFGGEVRTKSEEGPPEHMLNLELLDRFWRLSIPSGESRDHPLANPFGAGSPNLEEVKLDPILVIIGGNELLKDRAEDYATRLKKLGKDIEYVEFEGCEHGFFTHDSYSSQVAEEVIQILERFMLQTST 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02624 330 Coils Coil 270 290 - -
Spst1g02624 330 Gene3D alpha/beta hydrolase 15 329 IPR029058 -
Spst1g02624 330 PANTHER ARYLACETAMIDE DEACETYLASE 12 304 - -
Spst1g02624 330 Pfam alpha/beta hydrolase fold 76 304 IPR013094 GO:0016787
Spst1g02624 330 SUPERFAMILY alpha/beta-Hydrolases 5 324 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02624 Spst-Chr1 34702250 34704434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02624 7 310 Carbohydrate Esterase AT5G16080 34.202 1.77e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02624 - - vun:114190999 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02624 1 34702250 34704434 Spst1g02624 1 34702250 34704434 ECH
Spst1g02624 1 34702250 34704434 Spst7g00202 7 1492131 1494952 PCT