Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02566 ATGGATGCGTGGAACGAAGATTTTGCGGAGCTGGAGATTGGGAGCTCCACGGAATCGTTCCAAAAGTTTTTGCTTTCGCAGAGAGACCTCTTCCACAATCAGATCGACCAGTTTCAGGAAATCGTCGTCACGCAATGCAAACTCACCGGAGTCAATCCTCTCTCTCAAGAAATGGCGGCTGGTGCTTTGTCAATAAAAATTGGGAAAAGACCTAGGGATTTATTGAATCCAAAGGCTGTAAATTACATGCAATCAATTTTTTCGATTAAAGATTCTATTAGCAAGAAAGAGTTGCGTGAGATCAGTGCTTTGTTTGGTGTCACTGCGACGCAGGTGCGGGATTTTTTCACTGGTCAGCGTTCAAGAGTGAGGAGACTAGTGCAGTTTTCAAAGGAGAGGGCATTAAGTTCTAATTCTTGTGAGGGACCTCATGATGATCAAATAATTTCTGATCCTGTGAGACCAATAAATCCAGCTTCCCTAAACTCTACTGCCCCGTCCAATGCTGAAGAAGCGTCTTGTTCAACACAGGATGCAGCCTTGTCTGACCTAGATGACTCAGATAAACATTTTGTTGATAATATTTTTAGTTTAATGCAAAAAGAGGAGACATTTTCTGGGCAGGAGAAATTGATGGAGTGGATATTGACGATACAGAATTTTTCAGTATTGTTGTGGTTTTTGAGCAGAGGGGGTGGAATAACTTTAGCTACTTGGTTGAGTAAGGCAGCTGTTGAAGAGCAAACCAGTGTCCTTCTTCTTATCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCATTCCCATGCACATATCAGCTATATTGCAGAGTGTAAATAAACTACGGTTCTACAGGACATCAGACATATCAAACAGAGCAAGGGTTTTGTTGTCAAAGTGGAGCAAATTATTAGCGAGGAACCAAGTAATAAAGAAGCCCAATGGTGTCAAGCCTTCTAATGATGGTCATAAAGCGTTGATGCTTTCTCAGAGTGTTGGTCAATTTATGGGCTCTGAATCATGGCATTCAAATATTGATGTTCCCGAAGACTTTCTCACTCTCTCAAGTGAAAGTTCGGACAATTTCAGGAAAGTAGGATCTCCACAATCGGTGAAATTGTTGCCTCCTAGCTTGGATGATTCTAATAAAAAGTCCACACTTGGTGTATCTTCATCTCAATCTAGAGAGCGCAGAAAAGTGCAATTGGTGGAACAGCCAGGCCAAAAGTCAATGAGTAGAAGCTCACAAGTGACGAGAGCAGGGCCTGTAAGTCAAGGCCGTCCCATGTCCGCTGATGATATCCAGAAAGCAAAAATGCGTGCTTTATTTATGCAGAATAAGTATGGGAAATCCGGTTCCAAGGAAAGTAAAGAAACAAAGATTGATGGTCTGAATAAAAAACCTCAGACAACTACTGCCAGTATTGCAGCTTGCTCTTCTAAAGTTCCTACTCCTCCCAAAATTGAAGAAAACAAGAAACCTCTGTTACTTGCCTCTAAAACCAGTAATAGGCTTTCAAAACCGAAAATGGATGTGAAGGAACCTCTCTGGGAGAAGTGCAAGAGGGTTCAGATTCCATGGAAAACACCAGCAGAAGTGCAACTTAAAGATACCTGGAGAGTTGGTGACGGTGAAAATAGCAAAGAGATTGATGTCCAGAGAAACAGAAACCGCAGGGAAAAGGAAACTATATACCAGACTGTCCAAGAAATGCCACCTAATCCCAAGGAGCCTTGGGACCTTGAAATGGACTATGATGACACTTTGACGTTGGAAATTCCAATTGAACAGTTACCAGATGGTGATGGTGCAGATATAGCAGATTCCCCCAATCAGGTAGCAACTCATACTGTTCAAGGGGTGGCCTCCACTTCTTCAACAAGTATGACTCCTGCTGAGCCTGATTTAGAATTGCTTGCCGTACTGCTAAAAAATCCAGAGTTGGTATTTGCCTTAACTTCTGGACAAGCCGGTAGCATACCGAGTGAAGAAACAGTGAAGCTGCTTGACATGATCAAGAGAGGAGGTGCGAACTTGGGTTTAAGTGAAAATACAAATGGGAGTTATGGCACGAGTGTAAAAGCCCCGGAGAAGGTGGAAGTTTCTCTCCCATCTCCAACCCCTTTAAGCGATCCAAGAACGAGTGGATGGAGCTCAGAAGCATCCAAAAACCCCTTTTCACGGCGAGGTGTAGCACCTGATAGGATTATCCAGAACCATTCTGCAGTGGCAACTACCAACTTATTATCTCAGATTCCCGTAACTAGCACCACTACAGCAAGGCAACAGCCAACAGCTGTCGTTTCATCTTCGAGGCATTTCATAAGCACAGCAGTTACTCCATTTGCACTGCATCAGGCATCTAATATTAATCCTGAAAAGCAACCTTCAGTGAGGCATGTACAAATACCATCCTCAAACGTAGGTTTAACCATGAAGAAGAACTTAATCACTGCCAATGCATCTTCAGTTAACTTTTCTGGCACTCATTCAACTCTAGCAATGCGGGGTGATGGCACCAATTATGTAAAACCCGTACAGAATTTGAGTGTACAACATGAGGGTGTGGCTAATTCCTTCCCACAGTCATCCTTCAAGTTACCCTCACCAACGCCGTCAAATTCAGTCACACAGCAACAAAGACATCATCAACATGTGGTCCTCGAAGCCCATTACACTGAACCTCCTCATCGTAACCCTAGCCGTTCATACCCACCCCAAATCGAAAAATCAGATCATGGGTCTGAAAACATGTGGAGAGTTAGGCAAGATGTGTCATCCAGTTATCATTCTCAAAGAAATCATAACCATAATACAATGGTTGGGGGATCCAGGCAATCTGGCTTATGTGATAGAAATATTCAGGGTAGGGAAGATTTTGAATCATGGAGTCCCGAGAATAGTCCAACCAGAAATCCTAGGTGTGTACCAGGTAGAAACTACCCAGAGTCCAGAATAAATCAAGGAAGAGGTCATAGACCTGAATGGTCAAGGCAGAGGGGCTCTTCTGGACACTGGGACCCTGGCAAGCAGGGAAACAGAAATTGGCAAGATCAGAGACGATAA 3069 0.4327 MDAWNEDFAELEIGSSTESFQKFLLSQRDLFHNQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSIFSIKDSISKKELREISALFGVTATQVRDFFTGQRSRVRRLVQFSKERALSSNSCEGPHDDQIISDPVRPINPASLNSTAPSNAEEASCSTQDAALSDLDDSDKHFVDNIFSLMQKEETFSGQEKLMEWILTIQNFSVLLWFLSRGGGITLATWLSKAAVEEQTSVLLLILKVLCHLPLHKAIPMHISAILQSVNKLRFYRTSDISNRARVLLSKWSKLLARNQVIKKPNGVKPSNDGHKALMLSQSVGQFMGSESWHSNIDVPEDFLTLSSESSDNFRKVGSPQSVKLLPPSLDDSNKKSTLGVSSSQSRERRKVQLVEQPGQKSMSRSSQVTRAGPVSQGRPMSADDIQKAKMRALFMQNKYGKSGSKESKETKIDGLNKKPQTTTASIAACSSKVPTPPKIEENKKPLLLASKTSNRLSKPKMDVKEPLWEKCKRVQIPWKTPAEVQLKDTWRVGDGENSKEIDVQRNRNRREKETIYQTVQEMPPNPKEPWDLEMDYDDTLTLEIPIEQLPDGDGADIADSPNQVATHTVQGVASTSSTSMTPAEPDLELLAVLLKNPELVFALTSGQAGSIPSEETVKLLDMIKRGGANLGLSENTNGSYGTSVKAPEKVEVSLPSPTPLSDPRTSGWSSEASKNPFSRRGVAPDRIIQNHSAVATTNLLSQIPVTSTTTARQQPTAVVSSSRHFISTAVTPFALHQASNINPEKQPSVRHVQIPSSNVGLTMKKNLITANASSVNFSGTHSTLAMRGDGTNYVKPVQNLSVQHEGVANSFPQSSFKLPSPTPSNSVTQQQRHHQHVVLEAHYTEPPHRNPSRSYPPQIEKSDHGSENMWRVRQDVSSSYHSQRNHNHNTMVGGSRQSGLCDRNIQGREDFESWSPENSPTRNPRCVPGRNYPESRINQGRGHRPEWSRQRGSSGHWDPGKQGNRNWQDQRR 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02566 1022 MobiDBLite consensus disorder prediction 406 424 - -
Spst1g02566 1022 SUPERFAMILY Homeodomain-like 69 130 IPR009057 -
Spst1g02566 1022 MobiDBLite consensus disorder prediction 861 1022 - -
Spst1g02566 1022 Gene3D - 66 127 - -
Spst1g02566 1022 MobiDBLite consensus disorder prediction 708 726 - -
Spst1g02566 1022 MobiDBLite consensus disorder prediction 861 884 - -
Spst1g02566 1022 MobiDBLite consensus disorder prediction 684 729 - -
Spst1g02566 1022 MobiDBLite consensus disorder prediction 136 169 - -
Spst1g02566 1022 MobiDBLite consensus disorder prediction 961 975 - -
Spst1g02566 1022 MobiDBLite consensus disorder prediction 921 952 - -
Spst1g02566 1022 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Spst1g02566 1022 MobiDBLite consensus disorder prediction 360 432 - -
Spst1g02566 1022 SMART HOX_1 68 130 IPR001356 GO:0003677
Spst1g02566 1022 MobiDBLite consensus disorder prediction 375 397 - -
Spst1g02566 1022 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1006 - -
Spst1g02566 1022 MobiDBLite consensus disorder prediction 987 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02566 Spst-Chr1 34189648 34197843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02566 481 730 Homeobox Transcription Factor Family AT4G02560 48.000 1.00e-49 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02566 - - gmx:100780237 1702.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02566 1 34189648 34197843 Spst1g02566 1 34189648 34197843 ECH