Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02534 ATGATTGTTATACCACTCCCTATGTTTCTGTTTGCATTGTTTCTTTCACTCCTAACAAACACGGGCCAAATGGTATCTGCAAAAGGGAAGGACAATGTTAGAGAGGCTTGCAGTGTGACAAGGTTCCAAAGCCTTTGTGTTCACTCTCTATCACCTTTCTCCAACACTGCTGGAAGAAGCCCTAGCAAGTGGGCACGTGCGGGAGTGTCAGTATCAATAGGGGAGGTTAAGAATGTTAAATCCTATCTTGCAGAATTGAAGAGGCATGGACACATGAAGGGAAGAAACAAAGTTGCCGTTTCAGACTGTGTTGAATCCTTTTCCTATGCCCTTGATGAGCTTCACAGATCTCTTGGTGTGCTTAGGAGACTAAGCAAAACCACGTTTAGCACCCAAATGGGGGATCTCAACACGTGGATCAGTGCAGCCCTCACTGATGAAGAAACTTGCCTCGAAGGATTTGAAGACAACAATGAGAAACATGTTAAAGTACTGCAAAACCGGGTTCAGAATGTGTCTTACATCACCAGCAACGCTCTAGCTCTTGTCAACAAACTTGCTACCACAGGTCTCGGAAGCGTCAATGATCCATAG 594 0.4495 MIVIPLPMFLFALFLSLLTNTGQMVSAKGKDNVREACSVTRFQSLCVHSLSPFSNTAGRSPSKWARAGVSVSIGEVKNVKSYLAELKRHGHMKGRNKVAVSDCVESFSYALDELHRSLGVLRRLSKTTFSTQMGDLNTWISAALTDEETCLEGFEDNNEKHVKVLQNRVQNVSYITSNALALVNKLATTGLGSVNDP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02534 197 FunFam Pectinesterase inhibitor 3 28 187 - -
Spst1g02534 197 Pfam Plant invertase/pectin methylesterase inhibitor 32 182 IPR006501 GO:0004857
Spst1g02534 197 SMART PMEI_2 28 182 IPR006501 GO:0004857
Spst1g02534 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 182 - -
Spst1g02534 197 CDD PMEI-like_3 36 188 - -
Spst1g02534 197 NCBIfam pectinesterase inhibitor domain 8 186 IPR006501 GO:0004857
Spst1g02534 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 186 IPR035513 -
Spst1g02534 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 188 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02534 Spst-Chr1 33973816 33974409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02534 33 191 Carbohydrate Esterase AT3G14310 32.317 6.17e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02534 - - gmx:100791264 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02534 1 33973816 33974409 Spst1g02534 1 33973816 33974409 ECH