Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02521 ATGATCATTAAGCGTAGTATGAAATCTGAAATTCCAAAGCGGAAACTGTTCGAGTCAGAAAAAAGCGGGAATTGGAGGATTCAGAAGAAGTCGAAAGTAAACGGGGTTTATTCTGCTGATGGGGTCTCTGGATCCAGTGAGGCACTGTCCAATTCAAATTCCGTGTACTCAAATGACAAAATTCGAGACTTACCCCAACAATCAGAAGAAGGTGCTTGTGTCATTCAACCCCAGTCTTCTAGAGGTCGAGTCAAGAAGCTTCCTTGCAGGTTCAATGATTCAGTTCTTTATGAACGGGTCCGATCTGAAGACGAGAATAGGAGTGTTTCACAAGTCATTGCTGCCAAGTGTAATGAAAGAGATTCTACTTGTTTTCCTTTCTCTGCTGAGTTAATAGATTCTGAGTACTCGGTTAAGATGATTAAAAAGACTGTTAATGGTTGTCGTTCGATGTTTGTTAAAGAAAATAATAATGATGAGCCTGGACTAAGTTGTGATGCTGAGGGTGTGAATGGAAGAGGTAAAAGGAGGAAGGACGTTTACAGATTGGAGGATTTTTGTTTGGGGGATATAGTTTGGGCAAAATGTGGGAAGAGTCATCCTGCTTGGCCTGCTGTAGTCATTGATCCTTTCTTGCGAGCTCCACAATCAGTCATAAGCTATTGTGTTCCTGAGAATGATGATGGGCAGGACTATGCGTGGGTGAAGCAGGGGATGATATTCCCCTTCTGGGAATTCATGGACAGGTACGTGTATGTTGCAGTTGTTTCTGCAAGCGTGTTTGGTATTTGCTTACTAAAATTGCCTTTGTTCAGATTCCAGGGGCAGATCAGATTCTACAAAAGTAAAGCAATTGACTTTCACAAGGCAATGGAGGAGGCAATGTTGGCCGAAGATGGCATTTTGGACTTACACTTGGAAGCTGACCAAAATGTGGAGGGTGCGGATTCCCGTGTCGGCCACCGTTATTCCTATCAAGACCAGGGTACAATATCTTGTGCTGGCTGTGGTTTGATGTTGCCATGCAAAACCGTGAAGAAGATTAAAGATCCAAGTTCTGTTCCTCAGCACTATTGCAAGCCTTGTTCAAAGTTAATAAAATCGAAACAATATTGTGGCATTTGCAAAAAGATTTGGCACCATTCAGATGGTGGGAATTGGGTGAGATTGTCTACTTTCTCAATGTATGTTGTGATTGTTGCAATGTTTGGGTTCATGCGGAGTGTGACAAAATTTCTAGTAAACTTTTCAAGAAGACTGATTAGTTTAATTGATGAAGGATCTGGAAAATATGGATTACTATTGCCCCGATTGCAAGGGAAAATTCCTTCATCAATGGAGAATAACAGAAAACTTGTCTTACCTGAAAATCTTGCGGTGGTATGCAATGGCATGGAAGGAATCTATATTCCAAAGCTTCATTTGGTTATGTGCAATTGCGGCTTGTGTGGTTCACGGAAGCATACACTTACTGAATGGGAAAGACATGCAGGTTGCAAAGCCAAAAAATGGAAACATAGTGTGAAAGTAGAAAGCACAATGCAACCGCTAATAAATTGGATGCCAAATGGCTGTCCACCAAGAATGCTATGGGGCAAAGAATGTTCAGGACTTTACTTCCTGGGTGGGGCTCTGAAGCCAACTGATGTTGAGATGTTGTGGGTTCATGTCGCTTGCGCTTGGTTTCAGCCTGCAGTTCTTTTCCAAAACCATGAGGCAATGGAACCGGCCACTGGAATCCTTAAGATTCCTCGTAATTCCTTTTCGAAGTTGCATTCCATAGAAAAGAATGGGGCTACAACAACGAAGACACTAATATACTGTGCAACTCACAGAATGTTCATAGCTAAGCAAGGTCATTTTAGGGTCCCAAACCTAGATTCAGGACTGGTTGTACATACACCCATGGAGGTATTTTCACCGACAATTTCGCTTCAAAATCACCCACGGTGCTTCAGGGGATCAAGGCTGGCTTCATCAAAGAATGTAGAACTTCTTGAACCATCAAACTCTGAAATTCATGAGATTGATCCTCTGTCTGCTGCCCGCTGTCGTGTGTACATAAGGTCTTCCAATAAGAAGAATGTTGCGCCTTCAATTCACTTGCTTGGGGGGCCAAAGATTCATTCTTTAAGTGAAATAACTCAATTGAATGGCAACAAGGATGCTCAAGCTCGAGAGTTTTCTTCTCTTAAGGAACGTATTAACCATTTACGGAAGACAGAAAATCAAAGGGTTTGCTTAGGAAAATCAGGAATTCATGGATGGGGCCTCTTTGCTCGTAGAGATTTACAAGAAGGAGAAATGGTTGTTGAATATCGTGGTGAACAGGTACGACGTAGTATTGCTGACCTAAGGGAAGCAAAGTATCGTTCAGAAGGCAAAGATTGTTATTTGTTCAAGATCAGTGATGAAGTGATGATTGACGCAACGGATAAGGGCAATATGGCACGTATAATAAACCATTCTTGCATGCCAAACTGCTTTGCAAGGATTATGTGCTTGAGGGGTGAGGAGAATCGGATTGTTCTTATTGCGAAGACCAATGTTTCAGCTGGTGAAGAACTAACGTACGATGAGCCGGATGAACTGAAGTCAGAATGCCCCTTTAACCATGCACGAGAAGTGGTCGAAGATGAGGAAGTAGATGCAGTTTCAGCCAAAAATAGAGAAAGATGCAGGAAAAGAAGGAGTGTGATTGCGCAAAATATGGTTGGACGCTAA 2724 0.4225 MIIKRSMKSEIPKRKLFESEKSGNWRIQKKSKVNGVYSADGVSGSSEALSNSNSVYSNDKIRDLPQQSEEGACVIQPQSSRGRVKKLPCRFNDSVLYERVRSEDENRSVSQVIAAKCNERDSTCFPFSAELIDSEYSVKMIKKTVNGCRSMFVKENNNDEPGLSCDAEGVNGRGKRRKDVYRLEDFCLGDIVWAKCGKSHPAWPAVVIDPFLRAPQSVISYCVPENDDGQDYAWVKQGMIFPFWEFMDRYVYVAVVSASVFGICLLKLPLFRFQGQIRFYKSKAIDFHKAMEEAMLAEDGILDLHLEADQNVEGADSRVGHRYSYQDQGTISCAGCGLMLPCKTVKKIKDPSSVPQHYCKPCSKLIKSKQYCGICKKIWHHSDGGNWVRLSTFSMYVVIVAMFGFMRSVTKFLVNFSRRLISLIDEGSGKYGLLLPRLQGKIPSSMENNRKLVLPENLAVVCNGMEGIYIPKLHLVMCNCGLCGSRKHTLTEWERHAGCKAKKWKHSVKVESTMQPLINWMPNGCPPRMLWGKECSGLYFLGGALKPTDVEMLWVHVACAWFQPAVLFQNHEAMEPATGILKIPRNSFSKLHSIEKNGATTTKTLIYCATHRMFIAKQGHFRVPNLDSGLVVHTPMEVFSPTISLQNHPRCFRGSRLASSKNVELLEPSNSEIHEIDPLSAARCRVYIRSSNKKNVAPSIHLLGGPKIHSLSEITQLNGNKDAQAREFSSLKERINHLRKTENQRVCLGKSGIHGWGLFARRDLQEGEMVVEYRGEQVRRSIADLREAKYRSEGKDCYLFKISDEVMIDATDKGNMARIINHSCMPNCFARIMCLRGEENRIVLIAKTNVSAGEELTYDEPDELKSECPFNHAREVVEDEEVDAVSAKNRERCRKRRSVIAQNMVGR 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02521 907 CDD SET_SETD1-like 733 859 - -
Spst1g02521 907 SMART set_7 744 867 IPR001214 GO:0005515
Spst1g02521 907 Pfam PHD-zinc-finger like domain 541 590 - -
Spst1g02521 907 Gene3D - 452 529 IPR010919 -
Spst1g02521 907 Pfam SET domain 755 859 IPR001214 GO:0005515
Spst1g02521 907 FunFam Histone-lysine N-methyltransferase 719 874 - -
Spst1g02521 907 Pfam PWWP domain 189 295 IPR000313 -
Spst1g02521 907 SUPERFAMILY Tudor/PWWP/MBT 184 299 - -
Spst1g02521 907 Gene3D SET domain 704 862 IPR046341 -
Spst1g02521 907 SUPERFAMILY SET domain 741 859 IPR046341 -
Spst1g02521 907 Gene3D - 180 302 - -
Spst1g02521 907 PANTHER PHD FINGER PROTEINS 34 590 - -
Spst1g02521 907 ProSiteProfiles SET domain profile. 744 861 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02521 Spst-Chr1 33864762 33873538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02521 335 388 EF-hand Containing Proteins AT5G28340 53.704 1.27e-10 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst1g02521 PWWP 1.2e-07 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02521 - - csav:115705888 611.298