Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02506 ATGGGAGTAGGTTCGGAGTTAAGATTGCGCAATGCAGATGAGCTTCTTGGTCTGTGGCCAGGGACAAGAACATCATTGTTAACAACACTTTTTCGTGTTCATTTTATGGCGGCAGAGGTGGCGTTGTTATTTTCTGTGGCATCAGTGGTGGAGGACGTGCTTCAGCAGCACGGTCCTCGCCTCAAAGATCTTGATTTGGAGTCGAGGAAAGCAGAAGAAGCTGCATCCAGAAGATATGAGGCAGCGGGGTGGTTGAGAAAAATGGTTGGGGTTGTTGCGGCTAGGGATTTACCAGCAGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATTATTCTCTGTAATGTTATTAATAAAGTTCAATCCGGAGCTGTTCCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCATCGATCCCTGATGGGGCACCATTAACGGCATATCAATATTTTGAAAATGTGAGGAATTTCCTGGTGGCTGTCCAAGAAATTGGACTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCGTCTAGGATTGTCAATTGCGTGTTGGCCCTGAAGTCCTATAGTGAATGGAAAATGAGCGGGGCAAATGGCGTGTGGAAATTTGGTGGAAATCTTAAACCCACTGTGTCTACCAAATCTTTTGTTAGAAAAAATTCGGACCCATTTACTAATTCCTTGTCAAGAACTTCATCCATCAATGAAAAACAACTCAATGTTCTTAATTCTGACACTGAGTATGATAAAATGTCGGGTTCCCATTCTTTGAGTTCGCTTGTTCGTGCAATTCTATCGGATAAGAAGCCAGAAGAAGTTCCAATGTTGGTTGAATCTGTTTTGAGCAAGGTTGTAGAGGAGTTTGAACAACGAATAGCAAGCCAAGGTGAACAGGCAAAAGTAACGTCAATTGATCCTGTTTCTCAAAGCAATGTGTCTTTTGTAGCAGATAAAAAGGGGGAGAAGAAGATTCATATGGTAACGAATAAAGAGGATGCCATTCATAAAAATCATGTCAATGCTATGGTAACAAAAAAAGAGCATCACATTGACAAAAATCAAGTTGCTGATGAAGAATCGCAAAGACAACTTCTGAAGCAGAAAATGCTCTTTGACCAGCAGCAAAGAGAAATTCAAGAGCTAAGGCATACTCTTCACACAACAAAATCTGGTATGCAGTTCATGCAAATGAAATTTCATGAGGAGTTCTCCAACCTTGGAATGCACGTTCATGGCTTAGCTAATGCTGCTTCTGGATATCATAGAGTTCTTGAGGAAAATCGCAAACTATACAATCAAGTCCAGGATCTTAAGGGGAGTATTAGGGTGTATTGTCGAGTAAGACCATTCTTTCCTGGACAATCAAACGATTTGAGCGCAGTGGAAAATATAGAAGGTGGAACTATCACAGTTAATATTCTTTCAAAGAATGGGAAGGGACGCAGGTCCTTCAACTTCAACAAAATCTTTGGACCATGTGCAACCCAAGCTGAGGTCTTCTTAGACATGCAGCCACTCGTTAGATCTGTTCTTGATGGCTATAATGTTTGCATATTTGCGTATGGCCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCAAAAGAAATTACAGAGAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGCGATTTGTTTCTTATAGCGGATCAAAGAAAGGACACTTTCCATTATGACGTTTCTGTTCAAATGATTGAAATTTACAATGAGCAAGTCAGGGATCTTTTAGTCACTGATGGAACAAACAAAAGATATCCTTTACCAGTATATTTGATTCTCTTCGGTTTTGTATACAACAACAGAAAAATTCGCAGTAGTTCTCAAAAAGGACTCAGCGTGCCCGACGCAAGCCTTGTCCCTGTATCATCAACTATTGATGTTATTGAACTAATGAACCTTGGGCAAAGGAACCGTGCAGTTGGAGCAACAGCCCTTAATGACCGCAGTAGCCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCTGGAGCTATCCTTCGTGGATGCATGCATTTAGTTGACTTGGCAGGAAGTGAGAGGGTGGATAAATCTGAGGCCACAGGAGATAGATTAAAAGAGGCACAACATATTAACAAATCCCTTTCAGCTTTGGGAGATGTCATTGCTTCTCTTGCTCAGAAAAACTCACATGTACCCTATAGAAATAGTAAACTCACACAACTACTCCAAGATTCACTTGGAGGACAGGCAAAAACTCTAATGTTTGTTCACATAAGTCCCGAGTATGATGCTATTGGAGAAACGATTAGTACCTTAAAATTTGCTGAAAGAGTTGCCACTGTTGAACTTGGTGCTGCTAGAGTAAACAAAGATAGTGCAGATGTTAAAGAACTCAAAGAACAGATTGCCAGCCTTAAGGCAGCACTTGCAAGAAAGGAAGGAGAATCAGAACATACTTTATCCAGCAGCTCCGGAAAATACAGGATAAAGGGTAATGAGCTATCACCTTATCATATGAACCAGCGAGATACTGACACTGGGGATCAACTTGGATGCCGGCGACCAATGGTTGAGGTTGGCAATATAGAGCTTCAGACTAATACCAAAGTGAGGCACAAAACTCAAAGCTTTGATTTTGATGAGATATCAGCAAACTCACCACCATGGCCCCCAGTGAACAATAGTCTTGGACAAAACTATGGGGAGGATGACAAAGAATCTGGTTCTGGAGAATGGGTTGACAAGGTGATGGTCAACAACAAGCAAGACGTAAACAAAACTGAGAACCTCTTGGGGTGTTGGCAAGCAAGCAATGGGAACTTAGCTGAGGCCTTTTATCAAAAATATCTCAAAGATTCTCCCAAAATGTACTCAGAACAATCCTACAATATGTTCATAGGAGGCAACCAGTTTAACATTGCGGGTTCAGATGACACGGATGAGCTTGATGCTGCAACCAGTGATTCCTCAGAACCTGACTTGCTTTGGCAATTTAATCATTCCAAACTCAGCAGCATGACCAATGGAATTGGATCAAAGACTACGAGATCTATCTCAAAGTCAGCAAAAAGCCCAGAGTTGAGCAAGAATGGTGTTCAATCTTCTCCTTTGGGTCCTTCACCTTCATTGAAACAGTCAAATGGGGTCTCACATCGAACAGGAAGGCATCCGGCTCCAGTTGACGTGAAACGTAGAACCGGGAGTAGAAAATGA 3231 0.4191 MGVGSELRLRNADELLGLWPGTRTSLLTTLFRVHFMAAEVALLFSVASVVEDVLQQHGPRLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAARDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSASIPDGAPLTAYQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSSRIVNCVLALKSYSEWKMSGANGVWKFGGNLKPTVSTKSFVRKNSDPFTNSLSRTSSINEKQLNVLNSDTEYDKMSGSHSLSSLVRAILSDKKPEEVPMLVESVLSKVVEEFEQRIASQGEQAKVTSIDPVSQSNVSFVADKKGEKKIHMVTNKEDAIHKNHVNAMVTKKEHHIDKNQVADEESQRQLLKQKMLFDQQQREIQELRHTLHTTKSGMQFMQMKFHEEFSNLGMHVHGLANAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFFPGQSNDLSAVENIEGGTITVNILSKNGKGRRSFNFNKIFGPCATQAEVFLDMQPLVRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFLIADQRKDTFHYDVSVQMIEIYNEQVRDLLVTDGTNKRYPLPVYLILFGFVYNNRKIRSSSQKGLSVPDASLVPVSSTIDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEYDAIGETISTLKFAERVATVELGAARVNKDSADVKELKEQIASLKAALARKEGESEHTLSSSSGKYRIKGNELSPYHMNQRDTDTGDQLGCRRPMVEVGNIELQTNTKVRHKTQSFDFDEISANSPPWPPVNNSLGQNYGEDDKESGSGEWVDKVMVNNKQDVNKTENLLGCWQASNGNLAEAFYQKYLKDSPKMYSEQSYNMFIGGNQFNIAGSDDTDELDAATSDSSEPDLLWQFNHSKLSSMTNGIGSKTTRSISKSAKSPELSKNGVQSSPLGPSPSLKQSNGVSHRTGRHPAPVDVKRRTGSRK 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02506 1076 MobiDBLite consensus disorder prediction 1012 1076 - -
Spst1g02506 1076 FunFam Kinesin-like protein KIN-14I isoform A 441 829 - -
Spst1g02506 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 446 820 IPR027417 -
Spst1g02506 1076 ProSiteProfiles Calponin homology (CH) domain profile. 75 197 IPR001715 GO:0005515
Spst1g02506 1076 PANTHER KINESIN-LIKE PROTEIN KLP-3 82 989 IPR027640 GO:0003777|GO:0007018
Spst1g02506 1076 ProSiteProfiles Kinesin motor domain profile. 446 787 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g02506 1076 SUPERFAMILY Calponin-homology domain, CH-domain 72 207 IPR036872 -
Spst1g02506 1076 CDD CH_AtKIN14-like 77 194 - -
Spst1g02506 1076 MobiDBLite consensus disorder prediction 886 908 - -
Spst1g02506 1076 SMART kinesin_4 444 795 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g02506 1076 FunFam Kinesin-like protein KIN-14I isoform A 62 214 - -
Spst1g02506 1076 Gene3D Kinesin motor domain 441 828 IPR036961 -
Spst1g02506 1076 MobiDBLite consensus disorder prediction 886 915 - -
Spst1g02506 1076 Pfam Kinesin motor domain 452 786 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g02506 1076 Coils Coil 794 821 - -
Spst1g02506 1076 SMART ch_5 77 195 IPR001715 GO:0005515
Spst1g02506 1076 CDD KISc_C_terminal 444 789 - -
Spst1g02506 1076 MobiDBLite consensus disorder prediction 1012 1058 - -
Spst1g02506 1076 MobiDBLite consensus disorder prediction 1062 1076 - -
Spst1g02506 1076 Gene3D - 62 220 IPR036872 -
Spst1g02506 1076 Pfam Calponin homology (CH) domain 76 197 IPR001715 GO:0005515
Spst1g02506 1076 MobiDBLite consensus disorder prediction 816 835 - -
Spst1g02506 1076 PRINTS Kinesin heavy chain signature 519 540 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g02506 1076 PRINTS Kinesin heavy chain signature 688 706 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g02506 1076 PRINTS Kinesin heavy chain signature 737 758 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g02506 1076 PRINTS Kinesin heavy chain signature 657 674 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02506 Spst-Chr1 33736131 33742496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02506 434 823 Calmodulin-binding Proteins AT5G65930 39.744 1.25e-72 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02506 K10406 - gmx:100795476 1798.48