Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02481 ATGGAGGAGAATAAGAGGAAGAAGAGGGAACAGAACCGTGAACATGCAAGACAATCGCGGATGAAGAAGCGGAAGCGGGCGGAGGAGTTGATCAAGGAAGTGAGGACCTTGCAAAGTGAAAACAAGAAGTTGGTAGAGAGCATCAAGGCAAAGGAGAAAGCTTGTGCTGAGATCGCAGGTGCTAACAACATTTTGAGAGCACAATCTGCGGAATTGGTTGATCGACTGAACTTTCTGAACTCTACCATTTGA 252 0.4643 MEENKRKKREQNREHARQSRMKKRKRAEELIKEVRTLQSENKKLVESIKAKEKACAEIAGANNILRAQSAELVDRLNFLNSTI 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02481 83 MobiDBLite consensus disorder prediction 1 26 - -
Spst1g02481 83 Coils Coil 13 54 - -
Spst1g02481 83 Gene3D - 1 60 - -
Spst1g02481 83 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 2 49 IPR004827 GO:0003700|GO:0006355
Spst1g02481 83 Pfam bZIP transcription factor 5 58 IPR004827 GO:0003700|GO:0006355
Spst1g02481 83 PANTHER BZIP TRANSCRIPTION FACTOR 44 2 81 - -
Spst1g02481 83 SMART brlzneu 1 64 IPR004827 GO:0003700|GO:0006355
Spst1g02481 83 SUPERFAMILY Leucine zipper domain 5 57 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02481 Spst-Chr1 33523834 33524085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02481 2 83 bZIP Transcription Factor Family AT3G62420 46.341 1.65e-17 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst1g02481 bZIP_1 9e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02481 K25786 - gmx:100813053 90.1225