Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02480 ATGGGTTCTGTTGAAGCTTTGTCAAGTTCCGGATACAAAGGAGGAGATTCAGAAATGGAGGAGAAGAAGAAAAAGATGTTGAAGAACCGTGAATCAGCGAAGCGATCGCGAACTAGGAAGCAGGAGCAATTACTGAATGTCACTAATGAAGTCAACGATTTGCAAGGTGTAAACAAGAAGCTAGTAGAGTGCATAAAGGCAAAGGAAGAAGCATTCATTCAAACTGAAGCTGCTAACGATATCCTCAGGGCTCAGGCTAAGGAATTGACCGATCGATTGCGCTTCTTGAACTCTATTATTCAGGGTACTCAAGATGCCAAGGGATTATTTCTTTAG 336 0.4226 MGSVEALSSSGYKGGDSEMEEKKKKMLKNRESAKRSRTRKQEQLLNVTNEVNDLQGVNKKLVECIKAKEEAFIQTEAANDILRAQAKELTDRLRFLNSIIQGTQDAKGLFL 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02480 111 Coils Coil 79 99 - -
Spst1g02480 111 Pfam bZIP transcription factor 22 67 IPR004827 GO:0003700|GO:0006355
Spst1g02480 111 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 19 61 IPR004827 GO:0003700|GO:0006355
Spst1g02480 111 SUPERFAMILY Leucine zipper domain 22 70 IPR046347 GO:0003700|GO:0006355
Spst1g02480 111 FunFam BZIP transcription factor 19 70 - -
Spst1g02480 111 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 24 39 IPR004827 GO:0003700|GO:0006355
Spst1g02480 111 MobiDBLite consensus disorder prediction 1 43 - -
Spst1g02480 111 Gene3D - 20 101 - -
Spst1g02480 111 SMART brlzneu 18 81 IPR004827 GO:0003700|GO:0006355
Spst1g02480 111 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02480 Spst-Chr1 33518022 33518357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02480 20 111 bZIP Transcription Factor Family AT3G62420 47.826 2.35e-23 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst1g02480 bZIP_1 2.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02480 K25786 - ccaj:109814734 118.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02480 1 33518022 33518357 Spst1g02480 1 33518022 33518357 ECH