Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02475 ATGGAAATTGACCAATTTTCATCCACAACTTCAAATTTAAGAGAAACCCAAGTGGGTTATTGCTCTACACAAGAGGATGTGGTTCAAGCAAAAGGGATTTTCTCTGGAATGGAATTGCTGAGAGAGATTGATTATCTACCTATTGAGAACGAAAAAGGAACCAAATTGTTCGAGGATGAAGATCAGAAACAGCTACAAGAACCCCAAGTTGATAACTTGTTGTTAGAAGAGGTTAAATATGACTATGATATGCAACTGAAACCAACAGAACAATTGGATGGAACTACAGGGCCAGCGAAACATGGCATAGAATCAGCTGAAAACAAAAAGCAGGTGCCACCATCATTAGCATCCTTAGAGCTGCTGAGAAATTATGGAAGCAGATTGAAGAGGCTAAATGAGCAAAATATAAGCACCTTTCACAATACGAAAACCTCTTTGGATCACCAAAAGATATCAACTGAAGAAATTATAAGAGTGGCTGGAGCAAGGTATATTCAATATTCTGCACATTGGAATGATAGTTTTTGCATCCCTATGCACCCATACGGATTGGATGTTGGTATTTTGTCAGAGGAAGAAAATCGAGATGTAGAACTTGCTCAGTTTCTCCTTGCTGCAGCTGAGAGGGTAGGTTGCCAACAATTTGAACGTGCATGCAGGTTGCTTCTCCATTGTCAATGGAATTCATCAGTCGGTGCAAGCCCTGTTCAAAGAGTTATCTTTCACTTCGCTCGAGCACTTCGAGAGAGAATCGATAAAGAACTAGGAAGGATAACAGCTAAGGGATCAGCGAAAAATGAACAAAGGGAGTTCACTCAGAAGATTGACACCAACATTGCCCTAACATTCCATCAGAAAATTCCTTTCAATCAAGTGATGCAATTCGCTGGGATACAAGCTATAGTGGAACATGTTTCATCTGAGACCAAAATCCATCTCATAGATCTTCAAACAAGAATTGGGGTGCACTGCACAGCTTTGATGCAAGCACTGACTGAACGCCAGGATTGCAAAGTGCAACTTTTCAAGATAACCGCACTTGCACTTAATTCATGCAAAACCTTGATACAGGAGACTGGAAAAAGGTTAGCTAGTTTTGCTGAATCCTTGAACTTACCCTTTTCATATAATGCGGTTTTTGTGACAGACTTTGCAGAAATAAGGGAAGATCATTTTGAAATTGGAGAGGATGAAGCTGTGGCTGTCTACTCTCCATATTTTCTAAGGTGCATGGTATCAAGGCCAGATTGTATGGAAAACTTGATGAGGGTTATAAGGAATATCAAACCAGTTATAATGATAGTCCTTGAAGTAGAAGCTAACCATAACTCACCCTCCTTTGTGAACCGCTTCATTGAAGCATTGTTCTTCTACTCGGCATTTTTTGATTGCCTCGGAACCTGCATAAAACATGAGATTGAGCACAGAATGACAATAGAAGCAGTATTTTCTGATGGGATAAGAGACATCGTGGCAATGGAAGGGAGGGAAAGAAAAGTTAGAAATGTGAAGATCGATGTTTGGAGAAGATTCTTTGCAAGGTACCGGATGGTGGAAACCGGGTTTAGTGAGTCCTCTCTTTGCCATGCTCACTTGGTCAACAAAGATTTTGCTTTTGCGAAATTCTGCACTATAGACGAGAGTGAGAAGTGCCTCATTGTTGGATGGAAAGGGACCCCACTGTATTCAATCTCAGCTTGGAGATTTCTTTAA 1716 0.405 MEIDQFSSTTSNLRETQVGYCSTQEDVVQAKGIFSGMELLREIDYLPIENEKGTKLFEDEDQKQLQEPQVDNLLLEEVKYDYDMQLKPTEQLDGTTGPAKHGIESAENKKQVPPSLASLELLRNYGSRLKRLNEQNISTFHNTKTSLDHQKISTEEIIRVAGARYIQYSAHWNDSFCIPMHPYGLDVGILSEEENRDVELAQFLLAAAERVGCQQFERACRLLLHCQWNSSVGASPVQRVIFHFARALRERIDKELGRITAKGSAKNEQREFTQKIDTNIALTFHQKIPFNQVMQFAGIQAIVEHVSSETKIHLIDLQTRIGVHCTALMQALTERQDCKVQLFKITALALNSCKTLIQETGKRLASFAESLNLPFSYNAVFVTDFAEIREDHFEIGEDEAVAVYSPYFLRCMVSRPDCMENLMRVIRNIKPVIMIVLEVEANHNSPSFVNRFIEALFFYSAFFDCLGTCIKHEIEHRMTIEAVFSDGIRDIVAMEGRERKVRNVKIDVWRRFFARYRMVETGFSESSLCHAHLVNKDFAFAKFCTIDESEKCLIVGWKGTPLYSISAWRFL 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02475 571 ProSiteProfiles GRAS family profile. 191 569 IPR005202 -
Spst1g02475 571 MobiDBLite consensus disorder prediction 90 111 - -
Spst1g02475 571 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 144 564 IPR005202 -
Spst1g02475 571 Pfam GRAS domain family 201 569 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02475 Spst-Chr1 33458808 33460786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02475 189 570 GRAS Transcription Factor Family AT1G66350 27.937 8.86e-45 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst1g02475 GRAS 3e-78 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02475 - - gmx:100791952 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02475 1 33458808 33460786 Spst1g02475 1 33458808 33460786 ECH