Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02473 ATGGATAGTGATACTAATGCCTCCCCCCATCTTGAGTCAGAAGCATCTTCAGAGCTCAAATCATCAGACACTCAAACATCAAAGAAAAGGAAAATGGTTGAGAAAACAGTTGTGGCAGTGAGGATAGGAGAGAATGTTGGCAAGCTCAAGAATGAAGGGCTACCTTCGGATTTTTGGTCTTGGAGGAAATATGGACAAAAACCGATCAAAGGGTCTCCATATCCAAGGGGCTATTACAAGTGCAGCACATCCAAAGGTTGTTCAGCCAAAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAATGCTCATCATCACATATACCTCTACACATAACCATCCATGCCCCACCACCATCACCACAAATTCACCCCAACAACCAAAAGAATCCGAATCTGAAACCACCCAAGACCTCTCAGCTACCTCGAAGGAGGAAGATCAAGAACACATAGAAGAAGAGCAAAGGGATAATAAGCCCAGTGATGAAGGTACAAATGAAGAAAATTTTCTTTACTTGCAATCTCCAATACGATGCTCCCAAGACATAATTATAGAACAAGAAGACCCTTTCAAACTAAACACGGAGAAAAGCCATGAAAGAATAGATCTCCTCTTGGAGGAGCAAGAGCCCCTTTGTTATGCACAACTCAAGAACTTGTCTGCTTCAAAAAATGAAGAACTTGATTTTTTCGATGAGCTTGAGGAGTTGCCCATGTCGTCATCTTTCTTGCACTTCACGAGGAGCATTTTTTCCGATGAAAGAATTCCCGTTGCCCCTTCTTGA 783 0.424 MDSDTNASPHLESEASSELKSSDTQTSKKRKMVEKTVVAVRIGENVGKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASMLIITYTSTHNHPCPTTITTNSPQQPKESESETTQDLSATSKEEDQEHIEEEQRDNKPSDEGTNEENFLYLQSPIRCSQDIIIEQEDPFKLNTEKSHERIDLLLEEQEPLCYAQLKNLSASKNEELDFFDELEELPMSSSFLHFTRSIFSDERIPVAPS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02473 260 FunFam WRKY transcription factor 65 37 116 - -
Spst1g02473 260 MobiDBLite consensus disorder prediction 110 165 - -
Spst1g02473 260 MobiDBLite consensus disorder prediction 138 163 - -
Spst1g02473 260 MobiDBLite consensus disorder prediction 1 22 - -
Spst1g02473 260 Gene3D WRKY domain 42 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst1g02473 260 ProSiteProfiles WRKY domain profile. 50 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g02473 260 MobiDBLite consensus disorder prediction 110 137 - -
Spst1g02473 260 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 241 IPR044810 GO:0003700
Spst1g02473 260 Pfam WRKY DNA -binding domain 57 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g02473 260 SMART WRKY_cls 55 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g02473 260 MobiDBLite consensus disorder prediction 1 34 - -
Spst1g02473 260 SUPERFAMILY WRKY DNA-binding domain 53 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02473 Spst-Chr1 33443817 33445112 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02473 15 242 WRKY Transcription Factor Family AT4G01250 37.500 2.73e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst1g02473 WRKY 4.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02473 - - gmx:100127368 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02473 1 33443817 33445112 Spst1g02473 1 33443817 33445112 ECH