Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02470 ATGGAGTTGCAATTTGGAGTTTGCCGTGGCTATCATTTCCTCTTGAGAACTGCTGCTCAATCAATGAGTGGTGGCATATTAAAAAAGATTCAAGGCTTGGTGTTGAAATGGATACTTATATTATCTTGCCTGGCATTTATGATTGTGGCTGGTGTAAATGATAAAACAACGGAGCTACCTTCTTTATATGATTCTAGATCACCTTTGGCCTTTGTTGTTGTTCATGATCTACCTCTACCAGCGAATCTCCATGTGTCAAAGCATGTGCTTTCTCACGGTGCACCAATTGAAGCACTTTCACCAGTCAATCCTCCTTCATACGGTCCTTTCACAAGTAATGGCCAATCCCCTACAAGTTCACATTTATCCATACCATTCAAGAAGAAGAGTGAAATGAAACCTCCAATTTCTAGCTTTAAATATATTGCTCCTGTGCATTCTTCTGCAGCTGCAGGCCCTTCTGCTTTGACTCAGCCACCGTTGTCTCCTTATGCTTCCAATTGTTGTAAACAAGACATGGTGCTGAAAAGAGGCAGTAAGAGTTGCAACTGTGCATATCCCATAAAGCTAGACCTTTTTCTTTCGAATGTCTCTCAAAATCCTAGTTGGAATGATTTTCTTGATGAATTAGCTGTCCAGCTTGGGTTGCGAAATACCCAGATTGAACTGATAAACTTTTATGTACTCAGTGTATCAACATTAAATATTTCAATGAATATTACTCCACATAAAGGCATCAGTTTCTCTGCCAATGAAGTTTCTAAAATTAACTCATCGCTTTCAATGCATAAGGTTCAACTAGACCCTCAATTAGTGGGTGGCTATCAACTTCTCAATATAACGTGGTTTGAACCACCAGCTCCTTCACCAGCTCCTATTTTAGCTGCATCACCTGTGAAAACACCTTTCTATCATTCACCTACTGCTACATCATCATCATCATCCAGTCCTTCAGGAAGGCATTCGAATCTGTTTCTTATTCTTGGAATTGCTATTGGCATAATCTTCATTGCTATCATATCTGTACTTATATTCTGTTTATGTACATTCCTGCCAAAAGCAAACACTCCTCCCATTGAAACTGAAAAGCCAAGGACAGAGAGTACAATTTCAGCTGTGGGTTCTCTTCCCCACCCAAGTAGTACACGATTTATTGCTTATGAAGAGCTTAAAGAAGCAACAAACAACTTTGAAACAGCAAGTGTACTTGGAGAAGGAGGGTTTGGCAGAGTTTTTAAAGGTGTCTTGAATGATGGTACTCCTGTAGCAATTAAGAGGCTTACAAGTGGAGGGCAACAGGGTGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTTCAGTAATCGTGACTCATCACAAAATTTACTTTGCTATGAGCTTGTCCCTAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCTTTGGGAATTAATTGTCCTTTGGACTGGGACACCAGAATGAAAATTGCGCTTGATGCTGCAAGGGGACTTTCATACCTGCATGAAGACTCGCAGCCCTGTGTCATACATAGAGACTTCAAGGCATCCAACATATTGCTTGAGAACAACTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAAGCACCTGAAGGCAGATCTAATTATTTGTCTACTCGTGTCATGGGGACATTTGGGTACGTAGCTCCTGAATACGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGCGTTGTCTTACTGGAACTGCTTACTGGTAGGAAGCCTGTGGATATGTCACAGCCAACTGGACAAGAGAACCTTGTTACTTGGGCTAGGCCAATCCTTCGAGATAAGGACAGGTTGGAAGAGATTGTTGATCCAAGCCTTGGGGGAAAGTATCCCAAGGAAGATTTTGTACGTGTTTGCACTATTGCTGCAGCCTGTGTTGCTCCCGAAGCAAACCAACGACCCACAATGGGTGAAGTGGTGCAGTCACTTAAAATGGTGCAGCGCATCACAGAATACCATGATTCTGTATTAGCCTCATCCAATACTCGAACCAACCTGAGACAGTCCTCTAGTACTTTTGAATTTGATGGAACATCTTCTGTGTTCTCTTCGGGTCCTTACTCTGGTCTAAGTGCCTTTGAAAATGACAACATTTCTAGGACGGTGGTTTTCTCTGAAGACCTTTGTGAAGGACGATGA 2226 0.4187 MELQFGVCRGYHFLLRTAAQSMSGGILKKIQGLVLKWILILSCLAFMIVAGVNDKTTELPSLYDSRSPLAFVVVHDLPLPANLHVSKHVLSHGAPIEALSPVNPPSYGPFTSNGQSPTSSHLSIPFKKKSEMKPPISSFKYIAPVHSSAAAGPSALTQPPLSPYASNCCKQDMVLKRGSKSCNCAYPIKLDLFLSNVSQNPSWNDFLDELAVQLGLRNTQIELINFYVLSVSTLNISMNITPHKGISFSANEVSKINSSLSMHKVQLDPQLVGGYQLLNITWFEPPAPSPAPILAASPVKTPFYHSPTATSSSSSSPSGRHSNLFLILGIAIGIIFIAIISVLIFCLCTFLPKANTPPIETEKPRTESTISAVGSLPHPSSTRFIAYEELKEATNNFETASVLGEGGFGRVFKGVLNDGTPVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEEIVDPSLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYHDSVLASSNTRTNLRQSSSTFEFDGTSSVFSSGPYSGLSAFENDNISRTVVFSEDLCEGR 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02470 741 Gene3D Phosphorylase Kinase; domain 1 379 474 - -
Spst1g02470 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Spst1g02470 741 FunFam Receptor-like serine/threonine-protein kinase ALE2 377 474 - -
Spst1g02470 741 SUPERFAMILY Protein kinase-like (PK-like) 372 674 IPR011009 -
Spst1g02470 741 CDD STKc_IRAK 403 673 - -
Spst1g02470 741 Pfam Protein kinase domain 398 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02470 741 FunFam Receptor-like serine/threonine-protein kinase ALE2 475 693 - -
Spst1g02470 741 ProSiteProfiles Protein kinase domain profile. 397 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02470 741 ProSitePatterns Protein kinases ATP-binding region signature. 403 425 IPR017441 GO:0005524
Spst1g02470 741 PANTHER OS01G0750732 PROTEIN 165 696 - -
Spst1g02470 741 Gene3D Transferase(Phosphotransferase) domain 1 475 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02470 Spst-Chr1 33414018 33420140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02470 33 741 Receptor kinase-like Gene Family AT4G02010 67.511 0.0 955
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Spst1g02470 Pkinase 7.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02470 - - gmx:100793528 1278.46