Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02449 ATGGAAGAAACATTTGTACCATTCGAAGGAATCAAGAATGATCTGAGAGGAAGGTTGATGTGCTACAAGCAAGATTGGACGGGTGGAATCAAAGCAGGTTTAAGGATTTGGGCCCCCACCACATACATATTCTTCGCTTCTGCAATACCAGTCATTTCATTCGGGGAACAACTAGAGCGAGATACTGATGGTGTTCTCACTGCTGTTCAAACATTGGCATCCACTTCAATATGTGGCATCATACACTCAATCCTCGGAGGTCAACCTTTGCTGATTCTAGGAGTGGCAGAACCTACCGTTATCATGTACACATTCATGTTCAATTTTGCAAAAGAGAGACCAGAATTGGGCCGGAATTTGTTTCTGGCATGGACTGGATGGGTATGTGTCTGGACTGCACTGTTGCTATTCTTGCTGGCCATCTTAGGGGCATGCTCTATAATCAACAGGTTTACCCGTATTGCAGGCGAGTTATTTGGCATGCTGATTGCAATGCTCTTCATGCAGCAAGCCATCAAAGGACTTGTGGATGAGTTTCGCATACCACAAAGAGAAAATCCAAAATCAATTGAGTTTATACCTTCATGGAGGTTTGCTAACGGGATGTTTGCTCTGGTTCTTTCATTTGGCCTTCTCCTCACTGCATTAAGAAGCAGAAAGGCTAGGTCATGGCGTTATGGTACTGGTTGGCTTCGCAGCCTAATAGCAGACTATGGTGTGCCACTTATGGTCCTTGTTTGGACAGGTGTGTCCTACCTGCCAGCTGGAAGTGTTCCACATGGTATTCCAAGGCGCCTGTTCAGCCCGAATCCATGGTCACCGGGTGCATATGAGAATTGGACTGTTATTAAGGATATGGTTCATGTTCCTGTTGTCTACATAATCGGAGCATTTATCCCAGCCACCATGATTGCTGTGCTTTATTACTTCGACCATAGTGTAGCATCCCAGCTTGCTCAGCAGAATGAGTTCAATTTGAGAAAGCCATCTTCTTACCATTACGACTTGCTCCTTTTGGGATTTTTGACCTTAATGTGTGGCCTTATTGGAATTCCTCCTGCAAATGGAGTCATACCACAGTCCCCAATGCACACAAAGAGTCTGGCAACTCTTAAACATCAGTTGCTTCGGAACAAACTGGTGGTAACCGCACGAAGAAGTATGGGAAAGAATGCTAGTTTAGGACAGTTATATGGCAACATGGTAGAAGCCTACCATCAAATGCAGACCCCTCTTATTTATCAGGACCCCTCTTCTCGAGCACAAGGACTAAAAGAGCTTAAAGAATCAACCATTCAAGCAGCTACTAGTATGGGAAACATGGATGCCCCAGTAGATGAGACTATATTTGATGTTGACAAAGAAATAGACGATTTGCTTCCTGTTGAGGTTAAGGAACAGCGTCTCAGTAACTTGTTTCAAGCAATAATGGTGGGAGGATGCGTTGCTGCCATGCCTGTCCTAAAGAAAATACCAACCTCAGTCCTATGGGGCTATTTTGCCTTCATGGCCATTGAAAGTTTGCCAGGAAACCAATTCTGGGAAAGGATCCTACTGCTCTTCACTGCACCAAGCAGAAGATACAAGGTTCTTGAGGATTACCATGCTACTTTTGTAGAAACAGTTCCTTTCAAGACAATAGCAGCATTCACCATTTTCCAAACCATTTACCTTCTTATATGTTTTGGACTAACATGGGTTCCTATTGCCGGGGTCATGTTTCCAATGATGATCATGCTCTTAGTTCCCGTCAGACAGTACTTTCTCCCCAAATTTTTCAAGGGGGCACACCTTCAAGACTTGGATGCAGCAGCATATGAAGAGCAATCAGCTCTACCCTTTAACCTTGCAACACACTCAGAGTTTGGAGGTGGTGCCTCTCAGGTTGGAGAAGGTGAGATCCTAGATGAAGTTATCACTAGAAGCCGTGGCGAGTTTAGGCACACTAGCAGTCCAAAGATCTCAAGCTCCACCCCAACGCCAAGAACTGATCCTAAAAGCCATCTAAGCCCACGTCTCTCATTTAGTTCACGTGTGGGTGAACTAAAAACTGAGCAGAGTCCTCGATCTGGTGCAAGAGGTCCCCACAGTCCAAAGGGTGGAGAAGCGAGACTGTCAAATCTGGGAAGAAGTCCTCTTAATCCAGATTCGAAACAACACGACGACCACTAA 2172 0.4498 MEETFVPFEGIKNDLRGRLMCYKQDWTGGIKAGLRIWAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTSICGIIHSILGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWTGWVCVWTALLLFLLAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRIPQRENPKSIEFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGTGWLRSLIADYGVPLMVLVWTGVSYLPAGSVPHGIPRRLFSPNPWSPGAYENWTVIKDMVHVPVVYIIGAFIPATMIAVLYYFDHSVASQLAQQNEFNLRKPSSYHYDLLLLGFLTLMCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNKLVVTARRSMGKNASLGQLYGNMVEAYHQMQTPLIYQDPSSRAQGLKELKESTIQAATSMGNMDAPVDETIFDVDKEIDDLLPVEVKEQRLSNLFQAIMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIAAFTIFQTIYLLICFGLTWVPIAGVMFPMMIMLLVPVRQYFLPKFFKGAHLQDLDAAAYEEQSALPFNLATHSEFGGGASQVGEGEILDEVITRSRGEFRHTSSPKISSSTPTPRTDPKSHLSPRLSFSSRVGELKTEQSPRSGARGPHSPKGGEARLSNLGRSPLNPDSKQHDDH 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02449 723 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Spst1g02449 723 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016020
Spst1g02449 723 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Spst1g02449 723 MobiDBLite consensus disorder prediction 641 723 - -
Spst1g02449 723 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Spst1g02449 723 MobiDBLite consensus disorder prediction 649 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02449 Spst-Chr1 33189968 33193866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02449 1 694 Antiporters AT3G62270 82.446 0.0 1169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02449 K24194 - gmx:100776705 1386.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02449 1 33189968 33193866 Spst1g02449 1 33189968 33193866 ECH