Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02442 ATGGATGACTGTTGTGCTGTTTGCGCAGAGCCTTTGGAATGGGTCGCCTACGGACCCTGTTTGCATCGGGAGGTGTGTTCCACTTGTGTCGCTCGCCTCCGTTTCATTTGCGACGATCGCCGTTGTTGCATCTGCAAGACCGAATGCAACCGCGTATTCGTCACCAAGGCTCTGGGAGATTATACGAAGATGATTAATGACTTTGCTGCCATTCCTTCGGAGGTAAGGGAGGGCAAGATTGGATCATATTGGTACCATGAGGATACAAATGCATTTTTTGATGATGTGGACCATTACAAGATGATCAAGGCTATGTGCAGGCTCTCGTGCAGTGTATGTGACAAGATGGAGGAGCAACCACAGGATGCTGCTTCAAGGCCGCGAGCTAAGTTTAGGAATATAGGACAGTTGAAGGGTCATTTATTTCACCGTCACAAGTTGCATATGTGCGGTTTGTGTCTGGAGGGAAGAAAGGTTTTTATATGTGAGCAAAAACTATATACCAGAGCACAGTTGAACCAACACATTAGCACAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTCACGGGGCATCCAATGTGTGGATACTGCAGAACCCCATTTTATGGAGATAATGAATTATACATGCATATGTCTACAGAACATTATACATGTCATATATGCCAAAGGCAGCATCCAGGGCAGTATGATTACTTTAAGAATTATGATGACCTAGAGATTCACTTCCGTCATGAGCACTTCTTATGTGAAGATGAGGCTTGCCTTGCTAAGAAATTTATTGTTTTTCAATCTGAAGCAGAGATGAAGAGACATAATGCTATCGAACATGGAGGACGGATGTCAAGGTCTAAGCGAAATGCTGCTCTTCAGATACCAACTAGTTTCCGTTACAGACATGGTAATAATGAACACGAGCAACGCCGTGGAAGAAGTCGAACATTTCATCGTGATTTCACTGAAAATCAGCTTTCCATGGCCATTGAAGCGAGTCTAGAAACAGCTAATTCAGAGCAAACGAATCGTGATCAATCGGTGTCAGGTAGTGGGCGAGTTGCTGTTGATGATGGGAATGATGATATTGATTCTCTCATTCAGCCATTTGAATCATTAGCTGCATCTGGTTCTGAAGCATCTTCAAGATACCTTCAGGCCTTGGGGCATAGCTCAAGGAGTGGACCTCTGGAAGATTCTTCCTTTCCACCACTACCCATAACTTCCAACAGTGGCCAGCAAAGATCCAAACATGAATTGGAGGGCTCATCTAATAACTCTATGGCTGCCCGACTGCGTCGTCATGGCAACAGAACTGTAACCGTTATTAATTCTGGTAATGCTTGGCCAGCTGCAGGTCGTGGACTGGTACAGCCATCAAGTAATCCTTCACAATCTAGACCACCGGCAAATAATGCTCTTGGACTTTCTCGTGATTCTGGGCAGACAAAGAAAACAGTAATTAACAGTGGATTTTCACCATCAACTTATGCTGGTTCTATTCAGGTTACACAAAGAACTGCTCATGGACAATTACCCGGTGGTTCATTGAGGGACACACGTGACAATGTTAGAATCGTCCACTCTGCATCTGCTCCAAATCTCACGGAGACTAACTCTGTTGAAGCTTCATTATATGATTTTCCTCCTGTTTCTGCTTCACAAGTGAGCAAGTTACCTGCTAGCAGCCAGCCTTTAGTGAACGCGGAAAATTTTCAGTCTGCCAATAAGTCTCTGGTTGAAAAGATTCGAGGAGCTCTTGACTTTGATGAAGAAAGATACAGTATGTTTAAGGACATATCTGCCCAATATCGTCAAGGTACAATAGATACAGGCACGTATTTGGACTATGTGCAGCAGTTTGGCTTGTCTCATCTTGTGCTTGACTTGGCTAGACTATGCCCGGATACTCAGAAGCAGACAGAGCTTGTTGAGGCTTACAGTGCTAGTTTGCAAAGAGACGCTTTACTGGAAAATAACTTGGTTCGAAGCAGCGGTAGCACCCATCGCAAAGACAGTAATGTAAACAAGAAAGGTAAAGGTAAGTCTGTAGATAGTAGGGGGAGTAACTCCACAGCGAATTTAGCAGATAGCTTTTTAAGCACTGTGCATCAGCTACAAGCAAATTATAAATCTTCAGAAGAGAAGGTGGAGGTGCTATCAAAGGGTGATTACCGAGGTGACAGAGGCAAACTAAAAATCGAGCAGCGGATTGATACAAATTCTGGAAGTCAACCTGCAGTGAAGCTTAGTGGGAAGACCGAAACATCAAATGACAGTTTATCTACTCAAATTAGAGTGGATGGGGGTGGTGGAAACAAGCAACGCAAGAAAGGTTCAAAGTTCCTTAGAGTGCGACTTGGTGATTATGGTTCTGCTTCGGCCCTTCTTGATCAATCAGATTCTGGGACAGCAGACAGCTCAGAAGTTAACAAGGATGAATCTGGAGACGGAGGGCCACCTGTGCGTGGTGTTTGGCGAAATGGGGGAGGTCATAAACTTTTTCCCTAA 2517 0.4446 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTECNRVFVTKALGDYTKMINDFAAIPSEVREGKIGSYWYHEDTNAFFDDVDHYKMIKAMCRLSCSVCDKMEEQPQDAASRPRAKFRNIGQLKGHLFHRHKLHMCGLCLEGRKVFICEQKLYTRAQLNQHISTGDSEVDGSESERGGFTGHPMCGYCRTPFYGDNELYMHMSTEHYTCHICQRQHPGQYDYFKNYDDLEIHFRHEHFLCEDEACLAKKFIVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRHGNNEHEQRRGRSRTFHRDFTENQLSMAIEASLETANSEQTNRDQSVSGSGRVAVDDGNDDIDSLIQPFESLAASGSEASSRYLQALGHSSRSGPLEDSSFPPLPITSNSGQQRSKHELEGSSNNSMAARLRRHGNRTVTVINSGNAWPAAGRGLVQPSSNPSQSRPPANNALGLSRDSGQTKKTVINSGFSPSTYAGSIQVTQRTAHGQLPGGSLRDTRDNVRIVHSASAPNLTETNSVEASLYDFPPVSASQVSKLPASSQPLVNAENFQSANKSLVEKIRGALDFDEERYSMFKDISAQYRQGTIDTGTYLDYVQQFGLSHLVLDLARLCPDTQKQTELVEAYSASLQRDALLENNLVRSSGSTHRKDSNVNKKGKGKSVDSRGSNSTANLADSFLSTVHQLQANYKSSEEKVEVLSKGDYRGDRGKLKIEQRIDTNSGSQPAVKLSGKTETSNDSLSTQIRVDGGGGNKQRKKGSKFLRVRLGDYGSASALLDQSDSGTADSSEVNKDESGDGGPPVRGVWRNGGGHKLFP 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02442 838 MobiDBLite consensus disorder prediction 664 692 - -
Spst1g02442 838 MobiDBLite consensus disorder prediction 739 771 - -
Spst1g02442 838 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Spst1g02442 838 MobiDBLite consensus disorder prediction 338 365 - -
Spst1g02442 838 MobiDBLite consensus disorder prediction 451 498 - -
Spst1g02442 838 CDD RING-HC_ZNF598 3 54 IPR041888 -
Spst1g02442 838 MobiDBLite consensus disorder prediction 338 352 - -
Spst1g02442 838 MobiDBLite consensus disorder prediction 391 430 - -
Spst1g02442 838 MobiDBLite consensus disorder prediction 672 686 - -
Spst1g02442 838 MobiDBLite consensus disorder prediction 733 782 - -
Spst1g02442 838 MobiDBLite consensus disorder prediction 459 498 - -
Spst1g02442 838 PANTHER ZINC FINGER PROTEIN 598 1 736 IPR044288 GO:0061630|GO:0072344
Spst1g02442 838 MobiDBLite consensus disorder prediction 795 838 - -
Spst1g02442 838 SMART c2h2final6 221 251 IPR013087 -
Spst1g02442 838 SMART c2h2final6 197 220 IPR013087 -
Spst1g02442 838 SMART c2h2final6 252 281 IPR013087 -
Spst1g02442 838 SMART c2h2final6 108 145 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02442 1 837 C2H2 Transcription Factor Family AT3G62240 52.189 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02442 K22381 - gmx:100780426 1451.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02442 1 33118190 33121944 Spst1g02442 1 33118190 33121944 ECH