Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02431 ATGTCGTCTCCATCTCTGCCTACGGCGACACCAACTGCATTCCGCTGCTCATCCAGCACCGGCGTCGCTCTCAACCACATCCCCGCCGATAATCACGTTCAAATACGGACTTGTGTGAAAGATGCGAGCAACAAGAAAATCTTAGTGGACATGCTGCCGGCAATAGACAATCTCGTCCCAGCTAATTACTTGCTCGTATCCGGTGATAGAGACTTCTCCAACGCGCTTCACCAACTCAGCATAAGAAGGTACAACATTCTCCTCGCGCATCCGCCTCAAGTTTCTCCCTCCCTCTTCGCCGCCGCCAAAGTCGTTTGGCTCTGGACAACCCTCTCCGCCGGCAGTGGCCCTCTCCACTTTGCTGATTCTGACTCTGCCTCTGCCACTGTTAAACCCACCCCTCTCCCTGAACCACCTATTCATTTCAAATCCAAAACTAAATACATAAGAAAAAGTACTACGAAACCCCCAATTCCGCCTCTTCAAATACCTGACGAGAGTGAGAGTACCAACAATGATTCCCTAATACGGAACCGCCCCAACCACCGAGAAAGTTCGTTATCGGAGCTCCTCATGAATTCTTTGCTAGCAAATGTAACCAGCCTACAAAAGTTAATTGAAATTCCTCATGTTGTGAATGTTGCTACTCATACGTGGCTTGGTTCTAGACCAAGCATTAGCCATCCTGAGTTCAATGTGGAGAGGCTTATTGATGTTGTTATGAGAACTCTAAACTTTCTCAAGGTTGAAATGGTTGTGTCCACCGAGGCGCATATAACCGACTGCATTCGTTATGGGGATCCCGTATATCAGACAATTGATGTTAGGAAGGCCTTGGATTTTGCCATAGGCCAACGTAGGATAGAGAAACGAGTCCTTGGGGCGTTGCATTTGTATATTGGGAGAAATGAGACGCTCTGGAAGTGTGTGCACCATTCAGGGGGTCATCCTAGTGATTACCCACAAGAAACGTGGGACAGAGTTAAGCAATTCCTTACTTCATCAAGAGGGAGATTGTTGCTTTTGGTTTCGCGTTGCAGATTTGAAGCCTGTTTGATTCTAAAGAGATCGTGCCTTGAAGAGGTTGTATTAGGGGACGTGCTTAAAATTCTAGAGATGATGATCACGGTAAAGAAATGGATTATACATCATCATAGTGGGTGGCGGCCGATTACCATTAGGCTTAAGGAGAGTAAAGGTGATGCAGAATGGTGTTTTTTTCAGAGTCACAACACAACATAA 1242 0.4654 MSSPSLPTATPTAFRCSSSTGVALNHIPADNHVQIRTCVKDASNKKILVDMLPAIDNLVPANYLLVSGDRDFSNALHQLSIRRYNILLAHPPQVSPSLFAAAKVVWLWTTLSAGSGPLHFADSDSASATVKPTPLPEPPIHFKSKTKYIRKSTTKPPIPPLQIPDESESTNNDSLIRNRPNHRESSLSELLMNSLLANVTSLQKLIEIPHVVNVATHTWLGSRPSISHPEFNVERLIDVVMRTLNFLKVEMVVSTEAHITDCIRYGDPVYQTIDVRKALDFAIGQRRIEKRVLGALHLYIGRNETLWKCVHHSGGHPSDYPQETWDRVKQFLTSSRGRLLLLVSRCRFEACLILKRSCLEEVVLGDVLKILEMMITVKKWIIHHHSGWRPITIRLKESKGDAEWCFFQSHNTT 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02431 413 PANTHER LIMKAIN B LKAP 18 266 IPR024768 GO:0005777|GO:0010468
Spst1g02431 413 MobiDBLite consensus disorder prediction 149 178 - -
Spst1g02431 413 Pfam NYN domain 18 103 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02431 Spst-Chr1 32978163 32979772 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02431 18 123 C2H2 Transcription Factor Family AT5G61190 67.290 8.31e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02431 - K17573 gmx:100819329 430.254