Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02425 ATGGCATTGTCTGTGATAAGAACAAAAGGAGGCCTAGTTAAGCCAGCCGAGGATACTCCCTTGATCACACTAGATTTATCAGTGATTGATAGGTTACCTGTTCTAAGATGCAATGCTAAAACCTTGCACGTCTTCAAACACGGTCCTGAAGCAACAAGGGTCATAAGAGAGGCTCTCGCCAAGGCACTGGTTCCATATTACCCCCTTGCGGGAAGACTCAAAGAATCGCAACTAGGGTGCCTTCAAATTGAGTGCTCAGGTGATGGTGTGTGGTATGTTGAGGCATCTTCTGATTGCACCCTTCATTCTCTCAACTTCTTTGAGGATGTTCAGTCCATTCCGTATGATGATCTTCTTCCTCATGCTATTCCTGAGAGCCAAGGCATCGACCCCCTCGTGCAAATGCAGGTGACACAATTTGGTTGCGGGGGTTTCGTGATAGGCCTCATATTCTGCCACAGCATATGCGATGGTCTTGGTGCTGCACAGTTTCTAAACGCAGTAGGGGAAATAGCTAGGGGTCTAGAGAAACCCAGCATTGAACCAGTGTGGCAGAGGAACTTCTTTCCATCTCCTCAAACCCCCCAAGAACCTGCATTGCCACCAATACCACCCCCTCCACCTCAAATGCCAGAATATAAACTAGAGCATGCCAACATAGACATGCCCATGCATGAAATCAACCGTCTGAAGAGAGAATTTGAACAAGTGACTGGGCTGAAATGTTCAGCCTTCGAGATTGTAGCAGCAGCGTGTTGGACCACTCGAACAAGGGCCATTGAATTGGAGCCCAATGCGGAACTGAAGTTGGTGTTCTTTGCAAATTGCCGTCAACTAGTGGATCCTGCTCTGCCCAACGGTTTCTATGGCAATTGTTTCTTCCCAGTGACGATCACGGCTTCGTGTGAGTCACTTAGAAATGCATCAACGGTTGGTGTGGTGAAGCTGATACAAGAAGCGAAGGCCAAGTTAAGCGTGGAATTTGACAAGTTCTGGAAGGGTGAGCATTTGAAAAATGGGGAAGACCCTTTTGCGCCTCCACTAACCTACACCACTTTGTTCGTATCTGAGTGGGGGAGGCTGGGATTCAACCACGTGGACTACCAGTGGGGCCCACCCGTCCACGTGGTTCCCATACAAGGATCTACCATCATACCAGTGGCCATTGTGGGGTCCATGCCTCTTCCCAACAAAGGGATCCGTTTGATGACGTGGTGCGTGGAGGACGCACATCGCCTTTCTTTCCTTCATCACATGCATGGTGTCGTGAATCAGAAACTGAACCTGTAA 1290 0.4884 MALSVIRTKGGLVKPAEDTPLITLDLSVIDRLPVLRCNAKTLHVFKHGPEATRVIREALAKALVPYYPLAGRLKESQLGCLQIECSGDGVWYVEASSDCTLHSLNFFEDVQSIPYDDLLPHAIPESQGIDPLVQMQVTQFGCGGFVIGLIFCHSICDGLGAAQFLNAVGEIARGLEKPSIEPVWQRNFFPSPQTPQEPALPPIPPPPPQMPEYKLEHANIDMPMHEINRLKREFEQVTGLKCSAFEIVAAACWTTRTRAIELEPNAELKLVFFANCRQLVDPALPNGFYGNCFFPVTITASCESLRNASTVGVVKLIQEAKAKLSVEFDKFWKGEHLKNGEDPFAPPLTYTTLFVSEWGRLGFNHVDYQWGPPVHVVPIQGSTIIPVAIVGSMPLPNKGIRLMTWCVEDAHRLSFLHHMHGVVNQKLNL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02425 429 Gene3D - 202 411 IPR023213 -
Spst1g02425 429 Pfam Transferase family 8 380 - -
Spst1g02425 429 Gene3D - 2 201 IPR023213 -
Spst1g02425 429 PANTHER ACYL TRANSFERASE 4 3 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02425 Spst-Chr1 32952494 32954657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02425 12 378 Monolignol Biosynthesis Gene Families AT5G48930 27.877 5.22e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02425 - - gmx:100783128 713.375