Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02417 ATGTGCAAAGACGCTCACTCCATCTTGCAGAACATAGTCTCCGCTCTCGTCAACTCCAACTACGTCGGCACCGTCTCCTTCTTTGCCTATGGCGACACCAACCGCATTCCGCTGCCCATCCAACACGCCCTCTTCAGCACCGCCGTCGCTCTCAACCACATCCCCGCCAATGTAAAAGATAGGGACAAGAAGATCCTAGACAATCCCGTCCCCGCTAACTATTTGATCATATCTGACTACAGAGGCCTCTCACCGCGCTTTACCAACTCAGCATGCGAAGGTACAACATTCTCCTCGTGTATCTGCCCAAGTTTCTCCCTCCCTCTTCGTCGCCGCCAAAGTCGTTTGGCCGGCGGTGGCCCTCTCCACGTTGTCGATTCCGACTCTGCCTTCGCCTCTTTTAAACCCACCCCTCTCCCTGAACAGTTGACTCCAAATCGGAAAAGGAAAAGGGATTAG 459 0.5381 MCKDAHSILQNIVSALVNSNYVGTVSFFAYGDTNRIPLPIQHALFSTAVALNHIPANVKDRDKKILDNPVPANYLIISDYRGLSPRFTNSACEGTTFSSCICPSFSLPLRRRQSRLAGGGPLHVVDSDSAFASFKPTPLPEQLTPNRKRKRD 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02417 152 PANTHER LIMKAIN B LKAP 4 84 IPR024768 GO:0005777|GO:0010468
Spst1g02417 152 MobiDBLite consensus disorder prediction 131 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02417 Spst-Chr1 32805526 32807131 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02417 4 147 C2H2 Transcription Factor Family AT5G61190 40.828 1.76e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02417 - - pvy:116139202 103.605