Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02416 ATGCTGTTGTGGGCAGTAGACAATCCTGCCCCCGCTAACTACTTGCTCATATCCGGTCACAGAGACTTCTCCAATGCGCTTCACCAACTCAACATGCGAAGGTACAACATTCTCCTCGTGCATCCGCCGCAAGTTTCTCCCTCCCTCCTCGCCGCCGCCAAAGTCGTTTGGCTTTGGACAACCCTCTTTGCCGACGGTGACCCTCTTCACGTTACCGATTCCGACTCCGACTCTGCCTCCGCCTCTTATGTTAATTCAGCAATTTTGGCGCTCGAGCTTGAAAATGGACATGATGGACGTGGACGAAACTTCTGCACCCAGAGAGGGGAAGCCCGTTTTGGTGATATTGGTGGGAGCACCGGGAAGCGGGAAATCCACCTTCGGCGAAGAAGTAGTGCGTTCCTCTACTCGCCCTTGGGTTCGTGTTTGCCAGGTTTAGTTCACTCCCTTCAACCTGTTCAATGGGTTTCACTTTCACCCCTCAACCATCTTACTCCCATATGCAGAGAGATTGTGGGGTTCTGGTGTTGCTTCGATGTACAAAACCTTACTTTTGTGTGCACGAGGATACTGTTACCACCACTAAAACTAATGATCATGAAGGCTGAAGATAGTAAATGTACTGTTGTGCCAAGACTCAGCCTTTGCTTCAACCCCACTCTGAGAGAGAGAGAACAGGCTCGCCCAATACTTTGGATCTCATCTAACGCCGGTTATACTGTTTATTCATTTGCTTTAGGACACTATTGGAAATGGTAA 759 0.4954 MLLWAVDNPAPANYLLISGHRDFSNALHQLNMRRYNILLVHPPQVSPSLLAAAKVVWLWTTLFADGDPLHVTDSDSDSASASYVNSAILALELENGHDGRGRNFCTQRGEARFGDIGGSTGKREIHLRRRSSAFLYSPLGSCLPGLVHSLQPVQWVSLSPLNHLTPICREIVGFWCCFDVQNLTFVCTRILLPPLKLMIMKAEDSKCTVVPRLSLCFNPTLREREQARPILWISSNAGYTVYSFALGHYWKW 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02416 252 PANTHER LIMKAIN B LKAP 1 98 IPR024768 GO:0005777|GO:0010468
Spst1g02416 252 Pfam NYN domain 1 54 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02416 Spst-Chr1 32790195 32794288 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02416 1 74 C2H2 Transcription Factor Family AT5G61190 70.270 1.19e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02416 - K17573 gmx:100819329 120.938