Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02410 ATGAAGCGTGAGGAAGATAACCCAAATATGGGAATTTCACAATCGAGGACAGAGCTTCGGCTTTCTTCTTTGTTTGCTTGGCTTGTTGGAATTCTCAGTAAAGTTCCTTCTGCTGCAGCACATATGCCAAAAGGAGTTTTGCTTGAACTTCTTCGTAGATGTCTTCTAATATCACAATTTTTCAACAAGCAGCTGGTGGATTCAGCATTTCAGATTACAGAACTGATGGATGACAACTCCTTGATGCAGAAAGTTCAAAAGTTCTCTCACCTCAGTTTGTCCAATTTAGAGCAGGCAGATAATCAAAGCTCTTTATTAACTTCAAATAACATTTTCCAATATGAGGAATCTATACATGAAGCAGATAAAAAGCTAGAGTTAGTTAAACATCAGATTTTGAAAAGAGACAAGACAAAATTAGCAAGGCATAAAACCACCATATCATTGTGCATCGCTTCCAAGCTTGATAGGATGAATCCTTCTTGCCAGGTTCAGCCATCCCCAGAGAATGAACCTAGGGTATTCCTTAAATCACAATCACTTCACGCTAACTCCGTCTCGCAGAACATAGCCTCCGCTCTCGTCAATTCCAATTGCATCGGCGCCGTCTCCATCTTTGCCTACGGCGACATCAACCGCATTCTGCGACCCATCCAGCACGCCCTCTCCAGCACCGGCGTCGCTCTCAACCACATCCCCGCCGATGTGAAAGATAGGGACAAGAACATCCTAGTGGACATGTTGATATGGGCACTAGACAATCCCGCTCCCGTTAACTACTTGATCATATCCGGCGACATAAACCTCTCCACCGCGCTTCACAAACTCAACCTGCGAAGTTACAACATTCTCCTCGTGCATCCGCCACAAGTTTCTCCCTCCCTCTTCGCCGCCGCCAAAGTCGTTTGGCGTTGGACAATCCTCTCCGCCGGCGGTGGCCCTCTCTACGTTGTCGATTCCAACTCTGCCTCCGCCTCTGTTAAACCCACCCCTCTCCGAACAGCTTGA 1008 0.4653 MKREEDNPNMGISQSRTELRLSSLFAWLVGILSKVPSAAAHMPKGVLLELLRRCLLISQFFNKQLVDSAFQITELMDDNSLMQKVQKFSHLSLSNLEQADNQSSLLTSNNIFQYEESIHEADKKLELVKHQILKRDKTKLARHKTTISLCIASKLDRMNPSCQVQPSPENEPRVFLKSQSLHANSVSQNIASALVNSNCIGAVSIFAYGDINRILRPIQHALSSTGVALNHIPADVKDRDKNILVDMLIWALDNPAPVNYLIISGDINLSTALHKLNLRSYNILLVHPPQVSPSLFAAAKVVWRWTILSAGGGPLYVVDSNSASASVKPTPLRTA 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02410 335 Pfam NYN domain 181 300 IPR021139 GO:0004540
Spst1g02410 335 CDD PIN_limkain_b1_N_like 180 288 - -
Spst1g02410 335 PANTHER LIMKAIN B LKAP 180 309 IPR024768 GO:0005777|GO:0010468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst1g02410 Spst-Chr1 32671633 32678018 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02410 183 320 C2H2 Transcription Factor Family AT5G61190 59.712 4.65e-46 166